| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 514101 = | 76 (0.660) | 6 (0.060) | 5/232 | NT | 8.1% | coding (986/1041 nt) | PP_0426 | membrane protein |
| ? | NC_002947 | 514129 = | 64 (0.590) | coding (958/1041 nt) | PP_0426 | membrane protein | |||||
GCGCTGGGGGTGGCGGCTTATCTGGGATATCTGTCGTACGAGGTGTTTGCCCAGTCGTTGCTGTTCCCGGTGGTGCTGACCATGATCGGGCTGGGGGTTATCTGGCTTGGCCTGGTTTACCAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/514252‑514101‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAACGACTGGGCAAACACCTCGTACGACAGATATCCCAGATAAGCCGCCACCCCCAGCGCACCAAACACCATGAATACCGGCCGA > NC_002947/514129‑514277 GCGCTGGGGGTGGCGGCTTATCTGGGATATCTGTCGTACGAGGTGTTTGCCCAGTCGTTGCTGTTCCCGGTGGTGCTGACCATGATCGGGCTGGGGGTTATCTGGCTTGGCCTGGTTTACCAAAAGCGCCGGGAGCGGTTGAGCCAGGCG < 2:684147/150‑1 GCTTGGCCTGGTTTACCAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCT > 1:867221/1‑48 GCTTGGCCTGGTTTACCAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCT < 2:867221/48‑1 CAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAACGACTGGGC > 1:2997952/1‑108 CAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAACGACTGGGC < 2:2997952/108‑1 CAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATG < 1:2112222/76‑1 CAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATG > 2:2112222/1‑76 AAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAAC < 1:132474/99‑1 AAAAGCGCCGGGAGCGGTTGAGCCAGGCGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAAC > 2:132474/1‑99 CGCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAACGACTGGGCAAACACCTCGTACGACAGATATCCCAGATAAGCCGCCACCCCCAGCGCACCAAACACCATGAATACCGGC < 2:1929967/150‑1 GCTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAACGACTGGGCAAACACCTCGTACGACAGATATCCCAGATAAGCCGCCACCCCCAGCGCACCAAACACCATGAATACCGGCC < 2:1675302/150‑1 CTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAACGACTGGGCAAACACCTCGTACGACAGATATCCCAGATAAGCCGCCACCCCCAG > 1:2022477/1‑123 CTTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAACGACTGGGCAAACACCTCGTACGACAGATATCCCAGATAAGCCGCCACCCCCAG < 2:2022477/123‑1 TTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAACGACTGGGCAAACACCTCGTACGACAGATATCCCAGATAAGCCGCCACCCCCAGCGCACCAAACACCATGAATACCGGCCGA > 1:2719591/1‑150 GCGCTGGGGGTGGCGGCTTATCTGGGATATCTGTCGTACGAGGTGTTTGCCCAGTCGTTGCTGTTCCCGGTGGTGCTGACCATGATCGGGCTGGGGGTTATCTGGCTTGGCCTGGTTTACCAAAAGCGCCGGGAGCGGTTGAGCCAGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/514252‑514101‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctTTTGGTAAACCAGGCCAAGCCAGATAACCCCCAGCCCGATCATGGTCAGCACCACCGGGAACAGCAACGACTGGGCAAACACCTCGTACGACAGATATCCCAGATAAGCCGCCACCCCCAGCGCACCAAACACCATGAATACCGGCCGA > NC_002947/514129‑514277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |