| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 668980 = | 89 (0.780) | 5 (0.050) | 5/236 | NT | 5.4% | coding (419/2355 nt) | pbpC | peptidoglycan glycosyltransferase |
| ? | NC_002947 | 669010 = | 88 (0.790) | coding (449/2355 nt) | pbpC | peptidoglycan glycosyltransferase | |||||
CGCCGAAAGGTGCGCGGTTCAGGTAGATCTGCAGGATGTCGCGCTTGGACAAGTGCCATTCCAGCTGCAAGGTGCGCCATAGCTGGCGCAGTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/669075‑668980‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCA > NC_002947/669010‑669155 CGCCGAAAGGTGCGCGGTTCAGGTAGATCTGCAGGATGTCGCGCTTGGACAAGTGCCATTCCAGCTGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCAC > 1:111566/1‑110CGCCGAAAGGTGCGCGGTTCAGGTAGATCTGCAGGATGTCGCGCTTGGACAAGTGCCATTCCAGCTGCAAACTGCGCCAGCTATGGCGCACCTTGCAGCTGGAATGGCAC < 2:111566/110‑1 AGCTGCAAGGTGCGCCATAGCTGGCGCAGTTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCA > 1:133708/1‑71 AGCTGCAAGGTGCGCCATAGCTGGCGCAGTTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCA < 2:133708/71‑1 AAGGTGCGCCATAGCTGGCGCAGTTTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTGCAGAGCGTGGCGGCAGCCATCTGTGCGTACCTGGGCAAGTCGACCCTG > 2:2805936/1‑150 TTGCAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCA > 2:2398935/1‑150 CGCCGAAAGGTGCGCGGTTCAGGTAGATCTGCAGGATGTCGCGCTTGGACAAGTGCCATTCCAGCTGCAAGGTGCGCCATAGCTGGCGCAGTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/669075‑668980‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcAGCTGGAATGGCACTTGTCCAAGCGCGACATCCTGCAGATCTACCTGAACCGCGCACCTTTCGGCGGCACGCTTCAGGGCGTGGCGGCAGCCAGCTGGGCGTACCTGGGCAAGTCGCCCCTGCACCTGACACCTGCCGAAGCGGCA > NC_002947/669010‑669155 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |