| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 706880 | 78 (0.680) | 4 (0.040) | 4/212 | NT | 5.1% | intergenic (+53/+193) | PP_0599/rpsT | paraquat‑inducible protein B/30S ribosomal protein S20 |
| ? | NC_002947 | = 706965 | 80 (0.800) | intergenic (+138/+108) | PP_0599/rpsT | paraquat‑inducible protein B/30S ribosomal protein S20 | |||||
AGATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/706716‑706880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTACATCACTT < NC_002947/706965‑706822 AGATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTT < 1:297528/150‑1AGATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTT < 1:647582/150‑1 ATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGT < 1:2850146/150‑1 TGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTG < 2:1748993/150‑1 CGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACTTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGA < 1:1186606/150‑1 GCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCG < 1:1365092/150‑1 GCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCG > 2:2362357/1‑150 AGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGC > 2:1957592/1‑150 ATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCT > 1:1207344/1‑150 ATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCT > 1:2218125/1‑150 CCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGT < 2:1976077/130‑1 CCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGT > 1:1976077/1‑130 AGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGT > 1:1184882/1‑117 AGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGT < 2:1184882/117‑1 GAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTT < 2:905921/109‑1 GAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTT > 1:905921/1‑109 GCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGG < 1:504008/93‑1 GCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGG > 2:504008/1‑93 TGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAG > 1:1692134/1‑150 GCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAA < 2:1692134/150‑1 GTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGC > 1:2901154/1‑137 GTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGC < 2:2901154/137‑1 TGGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTAGCGGCCCTACTTTTA > 2:2133687/1‑150 GGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTAC > 1:573470/1‑150 GGGAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTAC < 1:1702372/150‑1 GAGCGGCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCCATCTCACTTTCTGCCCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTACCACAAAAAAGCAGGGCCGCGCTTGGTTTCCCTACTTTTACAT < 1:1642369/150‑1 GCCTTGTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTACCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTACATCACTT > 1:179237/1‑150 AGATGGCGAGCAGATGGGTAACCCGGCGCGGCCGCAGCAGACCTTTGCCTTGTTCGAAAAGGCCGAGGATGAATGGCTGCAGTGGGCACCGAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/706716‑706880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgTGTCGCGATAGGGCTGCGGGGCAGCCCCGGCAATCTCACTTTCTGCGCTGAGACCGAGGGGCCGCTACGCGCCCCTTTCGCGACGCAAGGCCGCTCCCACAAAAAAGCAGGGCCGCGCTTGGCGGCCCTACTTTTACATCACTT < NC_002947/706965‑706822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |