New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 741601 | 4 (0.030) | 4 (0.040) | 4/238 | NT | 50.6% | intergenic (+198/‑302) | PP_t12/PP_0635 | tRNA‑Thr/group II intron‑encoding maturase |
? | NC_002947 | = 741676 | NA (NA) | intergenic (+273/‑227) | PP_t12/PP_0635 | tRNA‑Thr/group II intron‑encoding maturase |
GCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/741451‑741601 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGC < NC_002947/741676‑741528 GCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGT > 1:2316287/1‑150 CCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTG > 1:707991/1‑150 ATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCA > 2:1137715/1‑150 CAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACAC < 1:1137715/150‑1 GGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCG < 2:2300907/122‑1 GGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCG > 1:2300907/1‑122 GGGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCC < 1:1859873/85‑1 GGGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCC > 2:1859873/1‑85 GTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTG < 1:1392133/150‑1 GTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTG < 2:2555748/150‑1 GTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTG < 1:2000066/150‑1 GTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCGAACACTCCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTgg < 2:927788/150‑3 GTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATGCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTG < 2:539616/150‑1 TGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGG < 1:270393/150‑1 TGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCAAACTGCGAACATTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGG < 2:1189210/150‑1 GCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGC < 1:1940282/150‑1 GCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGC > 2:2783428/1‑150 GCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGC < 2:447872/150‑1 GCCCGCCTTGTGCGGGCTTTTTTGTGTGCGCCAGGCATGGCGCGTTGCGCGTAAGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/741451‑741601 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGC < NC_002947/741676‑741528 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |