| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 786595 = | 98 (0.860) | 5 (0.050) | 5/222 | NT | 5.5% | intergenic (+14/‑291) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor |
| ? | NC_002947 | 786703 = | 84 (0.810) | intergenic (+122/‑183) | PP_0673/ettA | hypothetical protein/ADP/ATP ratio sensor/translation inhibitor | |||||
GGGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/786753‑786595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATCGG > NC_002947/786703‑786850 GGGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGG < 2:2872169/149‑1GGGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGG > 1:2872169/1‑149 GGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGC < 2:2529769/150‑1 GGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGC > 2:1621872/1‑150 GCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCG > 2:2502718/1‑150 gGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGC < 2:136354/149‑1 GATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGGGGCATCATAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCA > 1:1724297/1‑150 GATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCA > 1:1859990/1‑150 ATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCATGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCAC < 1:1918768/150‑1 GGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCA < 1:2478766/143‑1 GGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCA > 2:2478766/1‑143 TGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCA < 1:1609718/138‑1 TGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCA > 2:1609718/1‑138 TCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGC < 1:1296576/130‑1 TCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGC > 2:1296576/1‑130 GCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCC > 1:458340/1‑150 CGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTAT < 2:458340/150‑1 CCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCG > 2:1652468/1‑150 CCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTA < 2:1610851/132‑1 CCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTA > 1:1610851/1‑132 CCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGG < 2:2631116/150‑1 CCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGG < 1:1173928/150‑1 AGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATCGG > 2:1021374/1‑150 AGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATCGG > 1:2671975/1‑150 AGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATG < 1:434707/85‑1 AGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATG > 2:434707/1‑85 GGGGCCGATGGTGGGGTGTGATCAGTGCGGTCACTGGGATGAATTCATTGCCTGTGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGTCACCACAGAGCCTGAAGAATCCGCGATTCCTGTGGGAGCGGGCGAGCCCGCGAAAGGGCCGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/786753‑786595‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATCGG > NC_002947/786703‑786850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |