| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 850908 = | 103 (0.900) | 11 (0.110) | 7/208 | NT | 11.1% | intergenic (‑488/‑317) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
| ? | NC_002947 | 851046 = | 89 (0.910) | intergenic (‑626/‑179) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase | |||||
TCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/851074‑850908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctcctgaagtcgcGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGCGAAAGAGGA > NC_002947/851046‑851188 TCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCT > 2:1661453/1‑150 CTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTC > 2:2250400/1‑150 CTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTC > 2:2457419/1‑150 TGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCG < 1:1077098/150‑1 TGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCG < 1:1661453/150‑1 GGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGG < 2:1965130/150‑1 GGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGG < 1:2721209/150‑1 GGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGG > 1:1965130/1‑150 GCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGC > 2:2403102/1‑150 CTGATCTTGATCTTCGCCACTTCAGGAGGCCGAAACCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGGCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGT < 1:880475/150‑1 TGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTC > 1:270622/1‑150 TGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTC > 1:2430267/1‑150 TTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCC < 1:1199592/132‑1 TTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCC > 2:1199592/1‑132 TTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCG < 1:815857/126‑1 TTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCG > 2:815857/1‑126 CCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCC > 2:796004/1‑150 GCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCGCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCA > 2:1405935/1‑150 AGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCC‑TGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGA > 2:401815/1‑129 AGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCC‑TGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGA < 1:401815/129‑1 GACGGGCATCCATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTC > 1:1043447/1‑95 GACGGGCATCCATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTC < 2:1043447/95‑1 CATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAA > 1:1710721/1‑86 CATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAA < 2:1710721/86‑1 CCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCT < 1:1439883/74‑1 CCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCT > 2:1439883/1‑74 TCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCC‑TGCGCAAGGCCTGCTTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGA < 2:1517899/107‑1 TCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCC‑TGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGA > 1:1517899/1‑107 TGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGG < 1:1474488/135‑1 TGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACAACGCTAGGG > 2:1474488/1‑135 TGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCG > 1:2993429/1‑150 CTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGGCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGGCGCTGCGCTAT < 1:1405935/150‑1 AGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGG < 2:2993429/150‑1 GGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGC < 1:2819727/150‑1 GGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGC < 1:1495415/150‑1 GGCCTCCTGAAGTCGCGAAGATCAACAACCGGATCAAACGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGC > 1:82707/1‑150 CTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATAAATAGCCGACAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGCGAA < 2:82707/150‑1 TCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGCGAAA < 2:2111304/150‑1 cgGAAGTCGCGAAGATCAAGACCAGGATCAAAAGCCAGATCAAAAGCCGACAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGCGAAAGA < 2:2962835/148‑1 CTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGCGAAAGA < 1:591372/150‑1 CTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGCGAAAGA < 1:2751544/150‑1 CTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGCGAAAGA > 1:2392541/1‑150 CTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTA > 2:1798772/1‑71 CTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTA < 1:1798772/71‑1 AAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGCGAAAGAGGA > 2:314027/1‑150 GCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGC < 2:1797457/94‑1 GCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGC > 1:1797457/1‑94 GCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCCGCGCTATCAGCA < 2:1679613/104‑1 GCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCCGCGCTATCAGCA > 1:1679613/1‑104 TCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGTGCCCGAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/851074‑850908‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctcctgaagtcgcGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCAGCACAATAGCGAACGGTGGTTGTCCAAAAACCTGCGAAAGAGGA > NC_002947/851046‑851188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |