| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1083140 = | 108 (0.940) | 6 (0.060) | 6/228 | NT | 6.0% | coding (2790/3822 nt) | PP_0938 | hypothetical protein |
| ? | NC_002947 | 1083180 = | 87 (0.810) | coding (2830/3822 nt) | PP_0938 | hypothetical protein | |||||
TCAGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1083295‑1083140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctggGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCTGG > NC_002947/1083180‑1083327 TCAGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGTACACGAGCCTTGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACG < 1:2065233/150‑1TCAGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACG < 1:2917896/150‑1 AGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGC < 2:1905140/150‑1 GCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCC > 2:2835066/1‑150 CGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCT > 1:2060306/1‑150 CGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCT < 2:2795402/150‑1 CTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGC > 1:2448418/1‑61 CTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGC < 2:2448418/61‑1 GCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGT > 2:2999067/1‑115 GCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGT < 1:2999067/115‑1 AAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTATTTGCGCCTCGACAGCAAGGAAGTCATT > 1:2431172/1‑75 AAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGTATTTGCGCCTCGACAGCAAGGAAGTCATT < 2:2431172/75‑1 CGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAG < 1:694815/91‑1 CGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAG > 2:694815/1‑91 CACGGCCTGGTATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGA > 1:93821/1‑150 CTGGGATTTGCGCCTTGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCT > 1:1117354/1‑150 CTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCT < 1:2756413/150‑1 CTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCT < 1:225214/150‑1 CTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTG < 2:2086073/73‑1 CTGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTG > 1:2086073/1‑73 TGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCTG < 2:1396910/150‑1 TGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCTG < 1:2698164/150‑1 TGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCG < 2:1588638/51‑1 TGGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCG > 1:1588638/1‑51 GGGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCTGG < 2:1628080/150‑1 TCAGCGGCGCTGGCGGCAGGCAGCCGCAAGGTCTGCATGCGCACGACCACGGGCGCGCCCTTGGCATCCGGTACGCGCGCATTACCAATGACTTCCTTGCTGTCGAGGCGCAAATCCCAGGCCGGGCCGCCCCGGGCCAGGCGGACCACGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1083295‑1083140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctggGATTTGCGCCTCGACAGCAAGGAAGTCATTGGTAATGCGCGCGTACCGGATGCCAAGGGCGCGCCCGTGGTCGTGCGCATGCAGACCTTGCGGCTGCCTGCCGCCAGCGCCGCTGAACAGCAGGCTGAAGACGGCCCCGACCCGCTGG > NC_002947/1083180‑1083327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |