| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1102893 | 86 (0.750) | 9 (0.080) | 6/228 | NT | 9.1% | intergenic (+27/‑91) | ttg2E/ttg2F | toluene‑tolerance protein/BolA family protein |
| ? | NC_002947 | = 1102923 | 99 (0.930) | intergenic (+57/‑61) | ttg2E/ttg2F | toluene‑tolerance protein/BolA family protein | |||||
CCTGTCGCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1102737‑1102893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccctcgCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCAGTGG < NC_002947/1102923‑1102775 CCTGTCGCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGG < 1:2479517/150‑1 CTGTCGCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGACGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGC < 1:2312/150‑1 GTCGCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCC > 2:1206889/1‑150 CGCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCT < 1:285477/150‑1 gcgACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGGGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTC < 2:3043689/147‑1 GCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTC > 1:2779108/1‑150 CACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCG > 1:2662376/1‑150 CACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCG > 1:2724464/1‑150 CTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAG < 1:1632174/150‑1 CAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGC < 2:2662376/150‑1 AAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCC < 2:2724464/150‑1 ACGGATGATAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGG < 2:1651707/54‑1 ACGGATGATAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGG < 1:96037/54‑1 ACGGATGATAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGG > 1:1651707/1‑54 ACGGATGATAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGG > 2:96037/1‑54 CCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCC > 2:343135/1‑150 CCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGC < 1:956640/68‑1 CCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGC > 2:956640/1‑68 CCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCA > 2:185041/1‑150 CCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCA > 2:1094435/1‑150 CCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCAACCACGTCATCGAGATCATACACCAGGGCGAATTCCTCCATAGCATCAGGCATGCCACGCACCTCGCACGCCTTGCCA > 1:2983430/1‑150 CCTCGCCTGCGAAGACCAACGACGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCA > 2:1724524/1‑150 CTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCAG < 1:1030705/150‑1 CTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCA < 1:471873/119‑1 CTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCA > 2:471873/1‑119 CTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATC < 2:1551522/82‑1 CTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATC > 1:1551522/1‑82 CGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCAGTG < 2:135271/150‑1 CGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCAGTG < 2:396898/150‑1 GCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCAGTGG < 1:2313794/150‑1 GCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCG < 2:2388881/106‑1 GCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCG > 1:2388881/1‑106 CCTGTCGCTACTGCTGGCGTACATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1102737‑1102893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccctcgCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCAGTGG < NC_002947/1102923‑1102775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |