New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1126598 =	50 (0.440)	10 (0.110)	8/202	NT	20.5%	intergenic (‑47/+103)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
	?	NC_002947	1126656 =	36 (0.380)					intergenic (‑105/+45)	tdcG‑II/gcvP‑I	L‑serine dehydratase/glycine dehydrogenase

CAACGTGTTCGGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1126767‑1126598 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCC  >  NC_002947/1126656‑1126803                                                                                                                                                                                                                                                                                                                                CAACGTGTTCGGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGAGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCC                                                                                                                                                                          <  1:2188656/150‑1         TCGGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGC                                                                                                                                                                  <  2:1721080/150‑1          CGGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCG                                                                                                                                                                 <  1:342232/150‑1           GGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG                                                                                                                                                                <  1:1239017/150‑1                 CGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAAC                                                                                                                                                          >  2:2552822/1‑150                     ACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC                                                                                                                                                      <  2:1234779/150‑1                     ACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC                                                                                                                                                      <  1:2812280/150‑1                                                               CCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG                                                                                                                                                                <  2:690849/98‑1                                                               CCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGG                                                                                                                                                                >  1:690849/1‑98                                                                       CCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCG                                                                                                                                                                 <  2:442313/89‑1                                                                       CCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCG                                                                                                                                                                 >  1:442313/1‑89                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCTCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAG                                                                                                              >  1:69533/1‑88                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAG                                                                                                              <  2:69533/88‑1                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAG                                                                                                                         >  2:370085/1‑77                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAG                                                                                                                         <  1:370085/77‑1                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGA                                                                                                               <  1:2729369/87‑1                                                                                                                           CCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGACTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGA                                                                                                               >  2:2729369/1‑87                                                                                                                            CGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCG                                               >  1:1677756/1‑150                                                                                                                             GCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGA                                              >  2:580923/1‑150                                                                                                                                  TGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACG                                         >  2:1735128/1‑150                                                                                                                                     GATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGAGAGGGCTATCAGGCGGCCGGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTcg                                      >  2:2397950/1‑148                                                                                                                                                      CGCATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGG                     >  2:1462353/1‑150                                                                                                                                                        CATTCGCGGGTACACCCGATCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCG                   >  2:2283183/1‑150                                                                                                                                                        CATTCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCG                   <  1:1735128/150‑1                                                                                                                                                           TCGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCC                <  2:1690873/150‑1                                                                                                                                                            CGCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTAGCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCA               <  2:408280/150‑1                                                                                                                                                             GCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAG              >  2:887437/1‑150                                                                                                                                                             GCGGGTAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAG              >  2:2988201/1‑150                                                                                                                                                             GCGGGTAAACCCGCGCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAG              <  1:580923/150‑1                                                                                                                                                                  TAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTT         <  2:2046329/150‑1                                                                                                                                                                  TAAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTT         <  2:2812280/150‑1                                                                                                                                                                   AAACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTG        <  1:26473/150‑1                                                                                                                                                                    AACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGC       <  1:1101902/150‑1                                                                                                                                                                     ACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTaga                                                                                  >  1:2707719/1‑71                                                                                                                                                                     ACCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTAGA                                                                                  <  2:2707719/74‑1                                                                                                                                                                      CCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCT     <  2:1677756/150‑1                                                                                                                                                                      CCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCT     <  1:2312389/150‑1                                                                                                                                                                      CCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGC       <  2:89883/148‑1                                                                                                                                                                      CCCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGC       >  1:89883/1‑148                                                                                                                                                                       CCGCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTT    >  1:874682/1‑150                                                                                                                                                                         GCTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCC  <  1:1234779/150‑1                                                                                                                                                                                                                                                                                                                                CAACGTGTTCGGCGACCGCAACCTGGTGTGCGCCTGCCCGTCGATCGAGAGCTATCAGGACGCCTGATAGCCCTCCCCGCCACCTGGCTTGGGTGGCGGGCTCTGTGTAGGAGCGGGTTTACCCGCGAATGCGATGGTGGCTATACCTCCGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1126767‑1126598 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgcTCCTACACAGAGCCCGCCACCCAAGCCAGGTGGCGGGGAGGGCTATCAGGCGTCCTGATAGCTCTCGATCGACGGGCAGGCGCACACCAGGTTGCGGTCGCCGAACACGTTGTCGACCCGGCCGACCGGCGGCCAGTACTTGCCTTCC  >  NC_002947/1126656‑1126803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.