| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1316166 = | 91 (0.790) | 8 (0.070) | 9/230 | NT | 8.6% | intergenic (+35/‑66) | PP_1148/PP_mr15 | hypothetical protein/P20 ncRNA |
| ? | NC_002947 | 1316184 = | 84 (0.780) | intergenic (+53/‑48) | PP_1148/PP_mr15 | hypothetical protein/P20 ncRNA | |||||
CGACCATCAGCCCGACCGTTACCACACCGGCGATAACCACGTTGTCGAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGAGGC‑CGGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1316321‑1316166‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcacCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTCGCCTTCTTTGC > NC_002947/1316184‑1316331 CGACCATCAGCCCGACCGTTACCACACCGGCGATAACCACGTTGTCGAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGAGGC‑C < 2:1797999/150‑1 GACCATCAGCCCGACCGTTACCACACCGGCGATAACCACGTTGTCGAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGAGGC‑CG > 1:2756794/1‑150 CCATCAGCCCGACCGTTACCACACCGGCGATAACCACGTTGTCGAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGAGGC‑CGGG < 1:799512/150‑1 CATCAGCCCGACCGTTACCACACCGGCGATAACCACGTTGTCGAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGAGGC‑CGGGC > 2:764433/1‑150 TCAGCCCGACCGTTACCACACCGGCGATAACCACGTTGTCGAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGAGGC‑CGGGCAC > 1:882976/1‑150 CCCGACCGTTACCACACCGGCGATAACCACGTTGTCGAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCG‑GCCTCGGGCACCATT < 1:1678852/150‑1 GAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGGCCT‑CGTGCACCATTGACACTGAT < 1:787391/123‑1 GAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCG‑GCCTCGTGCACCATTGACACTGAT > 2:787391/1‑123 GAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGGCCT‑CGGGCACCATTGACACTGATCAA > 2:2127425/1‑123 GAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAA < 1:2127425/123‑1 AACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAAT > 1:164970/1‑123 AACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAAT < 2:164970/123‑1 ACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGAGGC‑CG > 1:1142300/1‑51 ACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGAGGC‑CG < 2:1142300/51‑1 TGGTGCCCGAGGC‑CGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCG > 2:1064678/1‑146 TGGTGCCCGAGGC‑CGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCG < 1:1064678/146‑1 CGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTCGCCTTC < 1:147465/150‑1 GGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATGGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGC > 2:1445799/1‑135 GGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCGTGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGC < 1:1445799/135‑1 GGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGG > 1:1924390/1‑133 GGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGG < 2:1924390/133‑1 GGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTCGCCTTCTT < 2:537886/150‑1 ACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTCGCCTTCTTTGC < 1:816578/150‑1 ACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTCGCCTTCTTTGC < 1:1496643/150‑1 CGACCATCAGCCCGACCGTTACCACACCGGCGATAACCACGTTGTCGAAGAACATGCTGGCCTCCCCATTCGTTTGCCGTTGTCCGATGGGTACACGTTAACCAATGTGGCGGCGGGGAAAATTGATCAGTGTCAATGGTGCCCGAGGC‑CGGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1316321‑1316166‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcacCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTCGCCTTCTTTGC > NC_002947/1316184‑1316331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |