| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1499465 | 36 (0.310) | 11 (0.120) | 9/198 | NT | 21.7% | intergenic (+35/‑131) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| ? | NC_002947 | = 1499502 | 50 (0.540) | intergenic (+72/‑94) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein | |||||
TCCGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1499294‑1499465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggagcgggcgtgcccgcgaaCACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGCTTCAGCGTTGTCGAA < NC_002947/1499502‑1499359 TCCGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGG < 1:1970353/150‑1 CGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCGATGGCGAGCAGGTNGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGGGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAAGAGTGAGGCTGCCAAACGGTG > 1:935527/1‑150 GCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGTACTACAGCAGGACTGAGGCTGCCAAACGGTGG < 1:593325/150‑1 GCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGG < 1:1820731/150‑1 GAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCG > 1:172912/1‑150 GGCCTGAGCTTCGGCCTGTGGCTCACTGGCGAGAAGGTTGCCGAAGCGCCCCAGTTCGACAACGCTGAAGCTCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGAACTGAGGCTGCCAAACGGTGGGAGCGGGC < 1:1145079/150‑1 GCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGG < 1:92670/148‑1 GCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTAAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGG > 2:92670/1‑148 CCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCTGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGTCTGCCAAACGGTGGGAGCGGGCGT < 1:1338359/150‑1 CCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGT > 2:2242438/1‑150 TGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGC > 2:240474/1‑150 AGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCC < 2:1471912/150‑1 CCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT > 2:1284346/1‑150 tctACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGG < 1:1284346/147‑1 TCGACAACGCTGAATCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGCCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGG < 1:2734946/150‑1 AACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGAATTGGTACCACAGCAGGACTGAGGCTTCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACG > 1:2834045/1‑150 CCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCAC < 2:2834045/150‑1 TGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGTGG > 2:2096492/1‑111 TGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGG < 1:2096492/111‑1 GCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGG < 1:276225/40‑1 GCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGG > 2:276225/1‑40 GCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGG < 1:276209/40‑1 GCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGG > 2:276209/1‑40 GACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAA‑ACAGGC‑GCGCCGGTGCCATGCACCGCGGCGCCTGT > 1:2820166/1‑76 GACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAA‑ACAGGC‑GCGCCGGTGCCATGCACCGCGGCGCCTGT < 2:2820166/76‑1 GCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCG < 1:2246522/77‑1 GCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCG > 2:2246522/1‑77 GCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGCTTCAGCGT > 2:2469276/1‑150 GTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCA > 2:961475/1‑132 GTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCA < 1:961475/132‑1 GTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTG < 2:1728214/92‑1 GTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTG > 1:1728214/1‑92 CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGCTTCAGCGTTGTCGA > 1:2242438/1‑150 CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAG > 1:415049/1‑101 CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTG > 2:2099931/1‑93 CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTG < 1:2099931/93‑1 CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCCCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAG < 2:415049/101‑1 CGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCGTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGCTTCAGCGTTGTCGAA > 1:642277/1‑150 CGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGCATGGCCGCATCACGGGCTTCAGCGTTGTCGAA > 1:1409722/1‑150 TCCGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1499294‑1499465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggagcgggcgtgcccgcgaaCACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTTTCGCGGGCACGCCCGCTCCCACCGTTTGGCAGCCTCAGTCCTGCTGTGGTGCCAAGGCTTCGTTCAGGCTCTGAATGGCCGCATCACGGGCTTCAGCGTTGTCGAA < NC_002947/1499502‑1499359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |