| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1750314 | 97 (0.850) | 8 (0.080) | 7/218 | NT | 8.0% | intergenic (‑37/‑52) | PP_1549/PP_1550 | Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator |
| ? | NC_002947 | = 1750325 | 97 (0.950) | intergenic (‑48/‑41) | PP_1549/PP_1550 | Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator | |||||
CACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1750156‑1750314‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaagcatgcttgCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAG < NC_002947/1750325‑1750177 CACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAA > 2:2830766/1‑150 GCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATG > 1:2148457/1‑150 GACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTT < 2:627738/150‑1 GACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTT < 2:2127118/150‑1 TAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGC < 2:839604/138‑1 TAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGC > 1:839604/1‑138 GATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGCATATTCAAAACAA < 1:1093006/150‑1 CCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGCATATTCAAAACAAGCAT < 1:606686/150‑1 CCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGCATATTCAAAACAAGCAT < 2:2148457/150‑1 GCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATG > 2:814939/1‑126 GCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATG < 1:814939/126‑1 CAGGTGTTAGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGCATATTCAAAACAAGCATGCT < 2:2440163/150‑1 GGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGCATATTCAAAACAAGCATGC > 2:1611340/1‑97 GGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGCATATTCAAAACAAGCATGC < 1:1611340/97‑1 GACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTC < 2:290400/59‑1 GACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTC > 1:290400/1‑59 TGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATG > 2:1244909/1‑55 TGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATG < 1:1244909/55‑1 GTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGCATATTCAAAACAAGC < 2:2065328/61‑1 GTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGCATATTCAAAACAAGC > 1:2065328/1‑61 TCAAGCATGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACAC < 1:353314/150‑1 AAGCATGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCT < 1:164610/150‑1 AAGCATGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCT < 2:3068413/150‑1 AAGCATGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGC < 1:490344/116‑1 AAGCATGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGC > 2:490344/1‑116 AGCATGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTG > 2:2627304/1‑150 GCATGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGC < 2:1499928/150‑1 GCATGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCAATTCACCAAACCCGTTCTTACCCTTCGCCCACAGTTCGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGC < 1:1148148/150‑1 TGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTC > 1:2991060/1‑87 TGCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTC < 2:2991060/87‑1 GCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAA > 1:485393/1‑150 GCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAA > 2:752452/1‑150 GCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAA > 2:2014754/1‑150 GCTTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAA < 2:1256182/150‑1 TTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATC < 1:2000237/150‑1 TTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATC > 2:2363698/1‑150 TTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATC > 2:409502/1‑150 TTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGC < 2:2778064/134‑1 TTGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGC > 1:2778064/1‑134 TGCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCA < 2:1224101/150‑1 GCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAG > 1:1771714/1‑150 GCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAG > 1:165275/1‑150 GCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAG > 1:2830766/1‑150 CACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1750156‑1750314‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaagcatgcttgCATATTCAAAACAAGCATGCTTGACAAGCAACCTTGTAGATTGCGCGAATGAAAACTACTGATCGAATCACCAAACTCGTCCTGACCCGTCGCCCACAGTTGGGCGTTCGCAATGTCAAACGCGACATCGCGAACACCTGCGGAATCAG < NC_002947/1750325‑1750177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |