| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1800899 = | 119 (1.040) | 8 (0.070) | 6/236 | NT | 6.3% | coding (841/3525 nt) | dnaEA | DNA polymerase III subunit alpha |
| ? | NC_002947 | 1800919 = | 122 (1.100) | coding (861/3525 nt) | dnaEA | DNA polymerase III subunit alpha | |||||
CAGCTCGAACTTCAGGCGGTCCAGGTAAACCTGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1801051‑1800899‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTGGCCGAAAGAGACCACGCCCAATTATGAAGAAAAGCGTCAGGTTTACCTGGACCGCCTGAAGTTCGAGCTGGACATCATCATCCAGA > NC_002947/1800919‑1801067 CAGCTCGAACTTCAGGCGGTCCAGGTAAACCTGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGT < 2:3006753/150‑1CAGCTCGAACTTCAGGCGGTCCAGGTAAACCTGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGT < 2:1864678/150‑1 GCTCGAACTTCAGGCGGTCCAGGTAAACCTGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCTAGGCCTTCGTGGGCCACATGGCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGG < 2:238441/150‑1 GCTCGAACTTCAGGCGGTCCAGGTAAACCTGACGCTTTTCTTCATAATTGGGCGCGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGG < 2:376874/150‑1 CTCGAACTTCAGGCGGTCCAGGTAAACCTGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGGG > 1:1420666/1‑150 CTCGAACTTCAGGCGGTCCAGGTAAACCTGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGGG > 2:2138257/1‑150 CAGGCGGCCCAGGTAAACCTGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCACGCCCAACGGCATGGGCATCGACGA < 2:388031/150‑1 TGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGG < 2:1893654/121‑1 TGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGG > 1:1893654/1‑121 AGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGG < 1:2455687/79‑1 AGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGG > 2:2455687/1‑79 GTCGATGCCCATGCCGTTGGGCGTGGGCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTG < 1:2534046/90‑1 GTCGATGCCCATGCCGTTGGGCGTGGGCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTG > 2:2534046/1‑90 TCGATGCCCATGCCGTTGGGCGTGGGCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTGGCCGAAAGAGACCACGCCCAATTATGAAGAAAAGCGTCAGGTTTACCTGGACCGCCTGAAG > 1:150892/1‑150 TCGATGCCCATGCCGTTGGGCGTGGGCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTG < 2:1553838/89‑1 TCGATGCCCATGCCGTTGGGCGTGGGCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTG > 1:1553838/1‑89 CATGCCGTTGGGCGTGGGCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTGG < 2:1093293/82‑1 CATGCCGTTGGGCGTGGGCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTGG > 1:1093293/1‑82 TGGGCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTGGCCGAAAGAGACCACGCCCAATTATGAAGAAAAGCGTCAGGTTTACCTGGACCGCCTGAAGTTCGAGCTGGACATCATCATCC > 2:2258217/1‑150 GCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTGGCCGAAAGAGACCACGCCCAATTATGAAGAAAAGCGTCAGGTTTACCTGGACCGCCTGAAGTTCGAGCTGGACATCATCATCCAGA > 1:2368126/1‑150 CAGCTCGAACTTCAGGCGGTCCAGGTAAACCTGACGCTTTTCTTCATAATTGGGCGTGGTCTCTTTCGGCCACAGCACGGCCAGGCGCTCTTCCAGGCCTTCGTGGGCCACATGCCGCAGGTAGTCGTCGATGCCCATGCCGTTGGGCGTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1801051‑1800899‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggCATCGACGACTACCTGCGGCATGTGGCCCACGAAGGCCTGGAAGAGCGCCTGGCCGTGCTGTGGCCGAAAGAGACCACGCCCAATTATGAAGAAAAGCGTCAGGTTTACCTGGACCGCCTGAAGTTCGAGCTGGACATCATCATCCAGA > NC_002947/1800919‑1801067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |