| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1899260 = | 121 (1.060) | 20 (0.200) | 13/214 | NT | 18.6% | intergenic (+288/‑232) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase |
| ? | NC_002947 | 1899320 = | 69 (0.690) | intergenic (+348/‑172) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase | |||||
ACGGCGCCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1899423‑1899260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTT > NC_002947/1899320‑1899468 ACGGCGCCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTAC > 1:2884644/1‑150 CGGCGCCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACC < 1:920026/150‑1 CGCCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGTCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGT < 2:2551964/150‑1 CCTTTGTCGTGAAGTGGTGGGGGCTGTCGTAATTAACTGCCTGTGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGG < 2:807306/150‑1 CCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGG < 1:1791238/150‑1 TTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGA > 1:3047620/1‑150 TCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGG < 1:2626790/150‑1 TCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGG < 1:2655171/150‑1 TCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGG > 2:721139/1‑150 CGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGG > 2:3027809/1‑150 CGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGG < 1:2729025/150‑1 GTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATACCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGC < 2:1772089/150‑1 TGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGG > 2:3065422/1‑147 TGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGG < 1:3065422/147‑1 GCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCAC > 1:88229/1‑150 ATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTC > 2:1561001/1‑150 GCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGT < 2:321051/125‑1 GCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGT > 1:321051/1‑125 TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCT > 1:2959387/1‑115 TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCT < 2:2959387/115‑1 TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAA > 2:1230835/1‑150 TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAC > 2:1253402/1‑102 TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAC < 1:1253402/102‑1 TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGG > 2:1836045/1‑82 TCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGG < 1:1836045/82‑1 CCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGG > 1:179557/1‑150 CACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGC > 2:168821/1‑150 AGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCC > 2:306793/1‑150 GGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGT > 2:1196855/1‑150 TCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGC < 1:1196855/150‑1 AAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCG > 2:2582722/1‑150 AGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGC < 1:306793/150‑1 GCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTT < 1:1230835/150‑1 GAGGGCGGCGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCAT > 2:2397155/1‑150 AGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGG < 1:168821/150‑1 AGTACCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGG < 2:179557/150‑1 CCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCA < 2:901676/150‑1 CCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCACTTGCATCAGCATGCCGGGGCA > 2:2739230/1‑150 CTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCCTCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAG > 1:1257066/1‑150 TGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGC > 2:495554/1‑150 tGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTTGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGC < 1:1442353/117‑1 GGAGCGGGTATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGC < 1:1772089/150‑1 GGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGC > 2:1442353/1‑118 GAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCC > 2:2183945/1‑85 GAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCC < 1:2183945/85‑1 CGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCAC > 2:2032178/1‑95 CGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCAC < 1:2032178/95‑1 GGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTT > 2:97967/1‑150 CATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCCTCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTT < 2:1257066/150‑1 CATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCGACGTTGA < 2:647885/73‑1 CATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCGACGTTGA > 1:647885/1‑73 ACGGCGCCTTTGTCGTGAAGTGGTGAGGGCTGTCGACGTTGACAGCCCGGGATGAGGTAGATCAGCAATTTATGGGCCAGCTATACCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGGATATCGCAAGGCCTGAGGGCGGCGCAGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1899423‑1899260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCAACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTT > NC_002947/1899320‑1899468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |