| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1899413 = | 106 (0.930) | 9 (0.090) | 7/224 | NT | 8.0% | intergenic (+441/‑79) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase |
| ? | NC_002947 | 1899467 = | 111 (1.060) | intergenic (+495/‑25) | PP_t18/PP_1703 | tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase | |||||
TGCCATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1899570‑1899413‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcctttTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAACTTTG > NC_002947/1899467‑1899615 TGCCATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACG < 2:2928402/150‑1TGCCATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACG < 1:1823971/150‑1 CCATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGTCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGC < 2:1810729/150‑1 CATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCG > 2:3066444/1‑150 CATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGATGCCGGCTCACCCGGCATGCTGATGCAAGCGGGGCAAAACGGCG > 2:298795/1‑150 ATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGC > 2:2938950/1‑150 ATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGC < 1:3001959/150‑1 CGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACTCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCT > 2:1966732/1‑150 GCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTT > 1:1421858/1‑150 AGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGC > 1:2928681/1‑101 AGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGC < 2:2928681/101‑1 GCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGG < 1:2345538/66‑1 GCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGG > 2:2345538/1‑66 AAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGG < 1:363702/127‑1 AAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGG > 2:363702/1‑127 GCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGG > 1:1447732/1‑43 GCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGG < 2:1447732/43‑1 GCTGCCCCGGCATGCTGATGCAAGCGGGGCAAC‑CGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGG > 2:2441280/1‑150 CCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATC < 1:1537985/121‑1 CCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATC > 2:1537985/1‑121 TGATGCAAGCGGGGCAAC‑CGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCG > 1:1355490/1‑105 TGATGCAAGCGGGGCAAC‑CGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCG < 2:1355490/105‑1 TGATGCAAGCGGGGCAAC‑CGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCG < 2:1355464/105‑1 TGATGCAAGCGGGGCAAC‑CGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCG > 1:1355464/1‑105 CGGCGCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGA < 2:613253/150‑1 gattCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTNCCGATGNCAAGGTCGGCAANATCAGCGGCGACAAGCTGCACCCGAGC < 1:2496343/146‑1 GCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGTGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAA > 2:2508688/1‑150 GCCTTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAA < 2:2457898/150‑1 TTTTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAACTT > 2:1879613/1‑150 TTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGCCCCGCGGCGACAAGCTGCACCCGAGCAACTTTG < 1:1810729/150‑1 TTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAAgatcg > 2:2496343/1‑145 TTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAACTTTG > 2:1016548/1‑150 TTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAACTTTG < 1:83540/150‑1 TGCCATCGGCAACGCTCATGACGATGCCGCAGCCCACGCCGCAGTAGGGGCAGACGCTGCGTACTTCGCTGTTGGCCATGGGCGGGCTCCTGTGGAAAACGCAAAAAGGCGCCGGCTGCCCCGGCATGCTGATGCAAGCGGGGCAACACGGCGCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1899570‑1899413‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgcctttTTGCGTTTTCCACAGGAGCCCGCCCATGGCCAACAGCGAAGTACGCAGCGTCTGCCCCTACTGCGGCGTGGGCTGCGGCATCGTCATGAGCGTTGCCGATGGCAAGGTCGGCAAGATCAGCGGCGACAAGCTGCACCCGAGCAACTTTG > NC_002947/1899467‑1899615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |