New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2045058 =	94 (0.820)	6 (0.050)	5/242	NT	5.6%	coding (229/1941 nt)	PP_1819	methyl‑accepting chemotaxis transducer
	?	NC_002947	2045091 =	109 (0.960)					coding (262/1941 nt)	PP_1819	methyl‑accepting chemotaxis transducer

CGCCAGCTCCTTGGCTTGCACGGCCTCGACAAAGGCTTCGAATGCCTGGCCATAGGCGGCGAGATCGGTTTGTGCCGCTGCCAGCGCCGGCAGGCCTCGGGCGCGTTCGACCAAACCCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2045207‑2045058 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGCATTCGAAGCCTTTGTCGAGGCCGTGCAAGCCAAGGAGCTGGCGCTGGACATGGCCAGCTGGTCGGTGTCCAACGT  >  NC_002947/2045091‑2045239                                                                                                                                                                                                                                                                                                             CGCCAGCTCCTTGGCTTGCACGGCCTCGACAAAGGCTTCGAATGCCTGGCCATAGGCGGCGAGATCGGTTTGTGCCGCTGCCAGCGCCGGCAGGCCTCGGGCGCGTTCGACCTATCCCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTG                                                                                                                                                       <  2:2411669/150‑1                                                                                                                     CCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGC                                                                             <  1:1267497/108‑1                                                                                                                     CCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGC                                                                             >  2:1267497/1‑108                                                                                                                     CCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCA                                                                                >  1:1819634/1‑105                                                                                                                     CCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCA                                                                                <  2:1819634/105‑1                                                                                                                       TGCAGGCCGCCACGCAAAGCGTCGGCCTGCAGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGCATTCGAAGCCTTTGTCGAGGCCGTGCAAGCCAAGGA                                         >  1:316309/1‑142                                                                                                                       TGCAGGCCGCCACGCAAAGCGTCGGCCTGCAGGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGCATTCGAAGCCTTTGTCGAGGCCGTGCAAGCCAAGGA                                         <  2:316309/142‑1                                                                                                                                                      GGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGCATTCGAAGCCTTTGTCGAGGCCGTGCAAGCCAAGGAGCTGGCGCTGGACATGGCCAGCTGGTCGGTGTCCAACGT  <  2:2766012/150‑1                                                                                                                                                                                                                                                                                                             CGCCAGCTCCTTGGCTTGCACGGCCTCGACAAAGGCTTCGAATGCCTGGCCATAGGCGGCGAGATCGGTTTGTGCCGCTGCCAGCGCCGGCAGGCCTCGGGCGCGTTCGACCAAACCCTGCAGGCCGCCACGCAAAGCGTCGGCCTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2045207‑2045058 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGGTTTGGTCGAACGCGCCCGAGGCCTGCCGGCGCTGGCAGCGGCACAAACCGATCTCGCCGCCTATGGCCAGGCATTCGAAGCCTTTGTCGAGGCCGTGCAAGCCAAGGAGCTGGCGCTGGACATGGCCAGCTGGTCGGTGTCCAACGT  >  NC_002947/2045091‑2045239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.