| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2720805 | 104 (0.910) | 6 (0.060) | 5/224 | NT | 5.6% | intergenic (+16/+34) | PP_2380/PP_2381 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 2720810 | 107 (1.020) | intergenic (+21/+29) | PP_2380/PP_2381 | hypothetical protein/hypothetical protein | |||||
GGAGGGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2720651‑2720805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgcTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTTGGCATCCTCGATGGTCAGGGTCAGAGGCA < NC_002947/2720810‑2720665 GGAGGGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGG < 1:2947109/150‑1GGAGGGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGG > 1:681908/1‑150 GACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCA > 1:1683191/1‑139 GACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCA < 2:1683191/139‑1 CATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAA < 2:226670/118‑1 CATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAA > 1:226670/1‑118 AAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAG < 2:897166/72‑1 AAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAG > 1:897166/1‑72 GCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGCTGAACGCGGCCCT < 2:1051366/81‑1 GCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGCTGAACGCGGCCCT > 1:1051366/1‑81 GACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGCTGAACGCGGCCCTTTGAT > 2:1314606/1‑76 GACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGCTGAACGCGGCCCTTTGAT < 1:1314606/76‑1 CATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGCTGAACGCGGCCCTTTGAT > 1:2079984/1‑61 CATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGCTGAACGCGGCCCTTTGAT < 2:2079984/61‑1 AAAGGGCCGCTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTTGGCATCCTCGATGGTCAGGGTCA < 2:2027002/150‑1 GGGCCGCTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCA > 2:1248032/1‑105 GGGCCGCTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCA < 1:1248032/105‑1 GCCGCTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGT > 1:2087317/1‑90 GCCGCTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGT < 2:2087317/90‑1 CCGCTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTTGGGAGCCGCGATGGTCAGGGTCAGAGGCA > 2:1159310/1‑150 CCGCTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTTGGCATCCTCGATGGTCAGG > 1:2967127/1‑140 CCGCTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTTGGCATCCTCGATGGTCAGG < 2:2967127/140‑1 CTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTT > 1:2400577/1‑118 CTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTT < 2:2400577/118‑1 GGAGGGTGACAAAGTGCCTCTGACCCTGACCATCGAGGATGCCAAGGGCGCCAAGGAAACCCTGGAAGTTCAGGCACAAGTGCGTGCGCTCAACGCCGACGCGGGTGGTGGGCATGATCACATGCACATGAACCACTGACAGATCAAAGGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2720651‑2720805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaagggccgcTGAACGCGGCCCTTTGATCTGTCAGTGGTTCATGTGCATGTGATCATGCCCACCACCCGCGTCGGCGTTGAGCGCACGCACTTGTGCCTGAACTTCCAGGGTTTCCTTGGCGCCCTTGGCATCCTCGATGGTCAGGGTCAGAGGCA < NC_002947/2720810‑2720665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |