| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2794953 = | 84 (0.730) | 6 (0.060) | 6/218 | NT | 6.7% | intergenic (+18/+94) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase |
| ? | NC_002947 | 2795030 = | 93 (0.910) | intergenic (+95/+17) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase | |||||
GCTGCGCGTACCCTTCAGCGCCATCGGTGCCTGGTACTACAGCCTGCGCGATCGCCTGGGCTTCTGATTCAGGCAGGCCTGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2795113‑2794953‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccggcgaagaGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGCTCTGCCTG > NC_002947/2795030‑2795175 GCTGCGCGTACCCTTCAGCGCCATCGGTGCCTGGTACTACAGCCTGCGCGATCGCCTGGGCTTCTGATTCAGGCAGGCCTGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTT < 1:2825573/150‑1GCTGCGCGTACCCTTCAGCGCCATCGGTGCCTGGTACTACAGCCTGCGCGATCGCCTGGGCTTCTGATTCAGGCAGGCCTGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTT > 2:1816737/1‑150 CTGCGCGTACCCTTCAGCGCCATCGGTGCCTGGTACTACAGCCTGCGCGATCGCCTGGGCTTCTGATTCAGGCAGGCCTGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTG < 1:2750073/150‑1 TACAGCCTGCGCGATCGCCTGGGCTTCTGATTCAGGCAGGCCTGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAG < 2:1280382/123‑1 TACAGCCTGCGCGATCGCCTGGGCTTCTGATTCAGGCAGGCCTGGCCTCTTCGCCGGCAAACCTGCGCACACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAG > 1:1280382/1‑123 CTGGGCTTCTGATTCAGGCAGGCCTGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGG < 1:2232109/100‑1 CTGGGCTTCTGATTCAGGCAGGCCTGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGG > 2:2232109/1‑100 CTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGT > 1:1812598/1‑124 CTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGT < 2:1812598/124‑1 CGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCG > 1:2767596/1‑150 GGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGC > 1:1219984/1‑150 AAACCTGCGCCCACACGGCCTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGC > 2:443251/1‑150 TGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGG < 2:1219984/150‑1 TTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACG > 1:47388/1‑150 CCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGCTC < 2:550236/150‑1 CGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGCTCT < 2:1206497/150‑1 CGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGG < 2:1355116/99‑1 CGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGG > 1:1355116/1‑99 GCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGCTCTGC > 2:2096980/1‑150 CGAAGAGGCCAGGCCTGCCTGAATCAGATGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGCGAACGGGTAGTGCGGCAGGCCGGCAAACGCTTCGAAACGCTCTGCC < 1:2256123/150‑1 GAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGCTCTGCCT > 2:1995810/1‑150 AAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCTGCAAAGGCGTCGAAACGCTCTGCCTt > 2:1745256/1‑149 GCTGCGCGTACCCTTCAGCGCCATCGGTGCCTGGTACTACAGCCTGCGCGATCGCCTGGGCTTCTGATTCAGGCAGGCCTGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2795113‑2794953‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgccggcgaagaGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGAAACGCTCTGCCTG > NC_002947/2795030‑2795175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |