| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2794965 | 84 (0.730) | 19 (0.190) | 10/218 | NT | 18.4% | intergenic (+30/+82) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase |
| ? | NC_002947 | = 2795016 | 93 (0.910) | intergenic (+81/+31) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase | |||||
GCTGGTGCAGCCACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2794806‑2794965‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgccggcaaACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGCCAATTCATCCG < NC_002947/2795016‑2794868 GCTGGTGCAGCCACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGTGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGTCGGTCAATGGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCT > 1:2276707/1‑150 CTGGTGCAGCCACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTT > 2:2422717/1‑150 TGGTGCAGCCACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTC < 1:1892576/150‑1 GTGCAGCCACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGC > 2:1940905/1‑150 GCAGCCACCGCGGCAACTTCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCG > 1:2888720/1‑150 GCAGCCACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCG < 2:1324391/150‑1 CCACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAAAGAGGCCTGTGCTGGCCTCTTCGCCGGCAA > 1:1543069/1‑150 CCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTC > 2:340249/1‑139 CCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTC < 1:340249/139‑1 CGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAACCTGC < 2:140759/150‑1 GATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATA < 1:1881096/150‑1 TGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCT < 1:717452/150‑1 TTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTG < 1:2621308/150‑1 CTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGG < 1:1040546/150‑1 GCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCT > 2:2817379/1‑138 GCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCT < 1:2817379/138‑1 CCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGT < 1:826887/127‑1 CCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGT > 2:826887/1‑127 CCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCT > 1:582755/1‑138 CCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCT < 2:582755/138‑1 CAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAA < 1:104441/150‑1 AGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCTGGCCTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGC < 2:1543069/150‑1 GGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGT > 1:1388411/1‑105 GGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGT < 2:1388411/105‑1 AGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTT > 1:2887824/1‑112 AGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTT < 2:2887824/112‑1 CCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACACGGACTGTGCAATAAGCACAAATCCT > 1:1873740/1‑64 CCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACACGGACTGTGCAATAAGCACAAATCCT < 2:1873740/64‑1 TCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAG > 2:1451476/1‑88 TCTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAG < 1:1451476/88‑1 CTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGC > 2:2364444/1‑150 CTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGC < 1:2913829/150‑1 CTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTG > 2:729173/1‑148 CTTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTG < 1:729173/148‑1 TTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGG > 2:927004/1‑105 TTCGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGG < 1:927004/105‑1 CGCCGGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGCCAA < 2:946858/150‑1 GGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCC < 1:946894/73‑1 GGCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCC > 2:946894/1‑73 GCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGCCAATTCAT > 2:2663351/1‑150 GCAAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGCCAATTCAT > 1:2701591/1‑150 AAACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGCCAATTCATCC > 1:2190507/1‑150 AACCTGCGCGCCCACGCACGGTGCAATAAGCACAACTCCTGTGGGCGCGGGGTTGCGGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGCCAATTCATCCG < 1:868930/150‑1 AACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCCATTGACCGACTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGCCAATTCATCCG > 2:2276707/1‑150 GCTGGTGCAGCCACCGCGGCAACTGCCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2794806‑2794965‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgccggcaaACCTGCGCCCACACGGACTGTGCAATAAGCACAAATCCTGTGGGCGCGGGCTTGCCGGCGAAGAAGCCGGCACAGGCAACGCTATTCGTTCAGGCTATTGACCGCCTGCTTCGCCGCAATCTCTTGCCCGGCCTTGGCCAATTCATCCG < NC_002947/2795016‑2794868 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |