| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2900029 = | 102 (0.890) | 6 (0.060) | 6/228 | NT | 6.2% | coding (644/1374 nt) | PP_2553 | MFS transporter |
| ? | NC_002947 | 2900054 = | 86 (0.800) | coding (619/1374 nt) | PP_2553 | MFS transporter | |||||
TGGCGGCGGCGGTATTCCTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2900182‑2900029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgtgcaCTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGGCTTCGCTGGGCATGAAGTAAGCCAGTGGCAGGAATACCGCCGCCGCCAGAACCTGGCCCGCTTGCA > NC_002947/2900054‑2900200 TGGCGGCGGCGGTATTCCTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCG < 2:2522550/150‑1TGGCGGCGGCGGTATTCCTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCG > 1:784373/1‑150 GGCGGCGGCGGTATTCCTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCGT < 1:1516749/150‑1 GGCGGCGGCGGTATTCCTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCGT < 1:2809511/150‑1 CGGCGGCGGTATTCCTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCGTGC < 2:2224942/150‑1 CGGCGGCGGTATTCCTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCGTGC < 1:415201/150‑1 CTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCGTGC > 2:1120529/1‑136 CTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCGTGC < 1:1120529/136‑1 GTAAGGAAGTGCACGAAACCCCAGCGTTCGTGCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAA > 2:1915506/1‑113 GTAAGGAAGTGCACGAAACCCCAGCGTTCGTGCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAA < 1:1915506/113‑1 GGAAGTGCACGAAACCCCAGCGTTCGTGCACTTCCTTACGGATGATGAAGCCT < 2:2110150/53‑1 GGAAGTGCACGAAACCCCAGCGTTCGTGCACTTCCTTACGGATGATGAAGCCT > 1:2110150/1‑53 GAAACCCCAGCGTTCGTGCACTTCCTTACGGATGATGAAGCCTGCAATCAG > 1:632240/1‑51 GAAACCCCAGCGTTCGTGCACTTCCTTACGGATGATGAAGCCTGCAATCAG < 2:632240/51‑1 TCGTGCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGGCTTCGCTGGGCATGAAGTAAGCCAGTGGCAGGAATAACGCCGCCGCCAGAACCTGGCCCGCT < 2:2490785/150‑1 GTGCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGGCTTCGCTGGGCATGAAGTAAGCCAGTGGCAGGAATACCGCCGCCGCCAGAACCTGGCCCGCTTG > 1:411308/1‑150 GTGCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGGCTTCGCTGG < 1:317666/95‑1 GTGCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGGCTTCGCTGG > 2:317666/1‑95 GTGCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGG < 1:2711455/86‑1 GTGCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGG > 2:2711455/1‑86 GCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGGCTTCGCTGGGCATGAAGTAAGCCAGTGGCAGGAATACCGCCGCCGCCAGAACCTGGCCCGCTTGCA > 2:1504464/1‑150 GCACTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATAAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGGCTTCGCTGGGCATGAAGTAAGCCAGTGGCAGGAATACCGCCGCCGCCAGAACCTGGCCCGCTTGCA > 2:2281116/1‑150 TGGCGGCGGCGGTATTCCTGCCACTGGCTTACTTCATGCCCAGCGAAGCCTTTACCGAATGGGGCTGGCGCATTCCGTTCCTGATGAGCGCCATCGTGCTGATTGCAGGCTTCATCATCCGTAAGGAAGTGCACGAAACCCCAGCGTTCGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2900182‑2900029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgtgcaCTTCCTTACGGATGATGAAGCCTGCAATCAGCACGATGGCGCTCATCAGGAACGGAATGCGCCAGCCCCATTCGGTAAAGGCTTCGCTGGGCATGAAGTAAGCCAGTGGCAGGAATACCGCCGCCGCCAGAACCTGGCCCGCTTGCA > NC_002947/2900054‑2900200 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |