| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2922852 | 103 (0.900) | 7 (0.070) | 6/228 | NT | 6.3% | coding (2444/2772 nt) | PP_2563 | antibiotic biosynthesis protein |
| ? | NC_002947 | = 2922862 | 112 (1.050) | coding (2434/2772 nt) | PP_2563 | antibiotic biosynthesis protein | |||||
AACTGGAAATGCGTCAGGTAGATATACAAGGTTGACGAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2922702‑2922852‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcttgccGGTGTTGGCTGGCAAGCGTTTACACACTATGTCGACATCGCCCTGCCAGCGATGCTGGCACTTGTCTGGTTCCGCTCGGTGCCAGTACCCGCCCTGGTTGCACGGGCAGGTGCGGTGATCGCTTCGTCAACCTTGTATATCTACCTGAC < NC_002947/2922862‑2922714 AACTGGAAATGCGTCAGGTAGATATACAAGGTTGACGAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCTACGACGAAAAAGCGATGTGGACATATTTTGTAAACGCTTGt > 2:2336000/1‑149AACTGGAAATGCGTCAGGTAGATATACAAGGTTGACGAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGC > 1:2058250/1‑150AACTGGAAATGCGTCAGGTAGATATACAAGGTTGACGAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGC > 2:1657502/1‑150AACTGGAAATGCGTCAGGTAGATATACAAGGTTGACGAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGC > 2:1136494/1‑150 gtcgacATACAAGGTTGACGAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGCCGGTGTTGGCTGGCAAG < 1:448811/144‑1 ACAAGGTTGACGAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGCCGGTGTTGGCTGGCAAGCGTT > 2:2048819/1‑146 ACAAGGTTGACGAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGCCGGTGTTGGCTGGCAAGCGTT < 1:2048819/146‑1 GAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGC > 1:2377022/1‑110 GAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGC < 2:2377022/110‑1 ACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTT < 2:2456386/98‑1 ACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTT > 1:2456386/1‑98 ACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGCCGGTGTTGGCTGGCAAGCGTTTA < 2:27704/110‑1 ACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGCCGGTGTTGGCTGGCAAGCGTTTA > 1:27704/1‑110 TACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGCCGGTGTTGGCTGGCAAGCGTTTA > 1:208818/1‑99 TACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGCCGGTGTTGGCTGGCAAGCGTTTA < 2:208818/99‑1 CGCTTGCCGGTGTTGGCTGGCAAGCGTTTACACACTATGTCGACATCGCCCTGCCAGCGATGCTGGCACTTGTCTGGTTCCGCTCGGTGCCAGTACCCGCCCTGGTTGCACGGGCAGGTGCGGTGATCGCTTCGTCAACCTTGTATATCT < 2:1383741/150‑1 CTTGCCGGTGTTGGCTGGCAAGCGTTTACACACTATGTCGACATCGCCCTGCCAGCGATGCTGGCACTTGTCTG > 2:321046/1‑74 CTTGCCGGTGTTGGCTGGCAAGCGTTTACACACTATGTCGACATCGCCCTGCCAGCGATGCTGGCACTTGTCTG < 1:321046/74‑1 TTGCCGGTGTTGGCTGGCAAGCGTTTACACACTATGTCGACATCGCCCTGCCAGCGATGCTGGCACTTGTCTGGTTCCGCTCGGTGCCAGTACCCGCCCTGGTTGCACGGGCAGGTGCGGTGATCGCTTCGTCAACCTTGTATATCTACC > 1:1841856/1‑150 TTGCCGGTGTTGGCTGGCAAGCGTTTACACACTATCGCATCATCGCCCTGCCAGCGATGCTGGCACTTGTCTGGTTCCGCTCGGTGCCAGTACCCGCCCTGGTTGCACGGGCAGGTGCGGTGATCGCTTCGTCAACCTTGTATATCTACC < 1:160919/150‑1 CCGGTGTTGGCTGGCAAGCGTTTACACACTATGTCGACATCGCCCTGCCAGCGATGCTGGCACTTGTCTGGTTCCGCTCGGTGCCAGTACCCGCCCTGGTTGCACGGGCAGGTGCGGTGATCGCTTCGTCAACCTTGTATATCTACCTGA < 1:2610867/150‑1 CGGTGTTGGCTGGCAAGCGTTTACACACTATGTCGACATCGCCCTGCCAGCGATGCTGGCACTTGTCTGGTTCCGCTCGGTGCCAGTACCCGCCCTGGTTGCACGGGCAGGTGCGGTGATCGCTTCGTCAACCTTGTATATCTACCTGAC > 1:2169089/1‑150 AACTGGAAATGCGTCAGGTAGATATACAAGGTTGACGAAGCGATCACCGCACCTGCCCGTGCAACCAGGGCGGGTACTGGCACCGAGCGGAACCAGACAAGTGCCAGCATCGCTGGCAGGGCGATGTCGACATAGTGTGTAAACGCTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2922702‑2922852‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcttgccGGTGTTGGCTGGCAAGCGTTTACACACTATGTCGACATCGCCCTGCCAGCGATGCTGGCACTTGTCTGGTTCCGCTCGGTGCCAGTACCCGCCCTGGTTGCACGGGCAGGTGCGGTGATCGCTTCGTCAACCTTGTATATCTACCTGAC < NC_002947/2922862‑2922714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |