| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2958817 = | 86 (0.750) | 12 (0.120) | 13/212 | NT | 15.9% | intergenic (+40/+102) | PP_2589/PP_2590 | aldehyde dehydrogenase family protein/ferric siderophore receptor |
| ? | NC_002947 | 2958876 = | 52 (0.520) | intergenic (+99/+43) | PP_2589/PP_2590 | aldehyde dehydrogenase family protein/ferric siderophore receptor | |||||
CCCAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2958980‑2958817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgggcGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGCGAT > NC_002947/2958876‑2959023 CCCAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAAC < 2:1333599/150‑1CCCAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAAC < 1:1882542/150‑1 CCAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACC > 1:2696592/1‑150 CAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCT < 1:1439208/150‑1 AGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTG < 2:965137/150‑1 GACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGT < 1:1353683/150‑1 ACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTG < 1:668935/150‑1 CCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGG < 2:942185/150‑1 CCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGG < 1:215481/150‑1 CCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGTACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGG > 1:2149349/1‑150 GGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCG < 1:2420475/150‑1 GGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGG < 1:2408533/150‑1 GTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGG > 1:1827976/1‑112 GTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGG < 2:1827976/112‑1 TTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGG < 2:2451864/100‑1 TTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGG > 1:2451864/1‑100 AACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGT < 1:1116143/94‑1 AACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGT > 2:1116143/1‑94 GGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGG < 2:1209820/74‑1 GGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGG > 1:1209820/1‑74 GCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCC < 1:1190069/72‑1 GCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGAGACCGCGAAGAGGCC > 2:1190069/1‑72 ACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAG > 1:1493770/1‑63 ACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAG < 2:1493770/63‑1 AGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTG > 1:1230382/1‑150 GTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAA < 1:1563477/94‑1 GTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAA > 2:1563477/1‑94 TCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACG > 2:2197053/1‑100 TCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACG < 1:2197053/100‑1 AACCCTCAGACTTGTGCTGGACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCA > 1:1015898/1‑150 ACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTA < 2:1359401/73‑1 ACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTA > 1:1359401/1‑73 CTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCC < 2:1777905/150‑1 ctcttcGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCA > 2:20115/7‑150 gGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAG < 2:361382/149‑1 GGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGG < 2:2408533/150‑1 AGCGGGCATGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTG < 2:1353683/150‑1 CGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCTTTGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCCGGTTGGC < 1:2383333/150‑1 GGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGCG > 2:194085/1‑150 GCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTTAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGCGAT < 2:2878589/150‑1 CCCAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2958980‑2958817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgggcGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGCGAT > NC_002947/2958876‑2959023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |