New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3045915 | 93 (0.810) | 10 (0.090) | 9/240 | NT | 10.1% | coding (449/894 nt) | pstA | phosphate ABC transporter permease |
? | NC_002947 | = 3045948 | 86 (0.760) | coding (482/894 nt) | pstA | phosphate ABC transporter permease |
TCCTGGCAGCGGTGTTCCTGGCCGAACTCGGCCCCGACAGCAAACTGGCCAACGCTGCGCGCTTTGCCGCCAAGATGCTCACTGGCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3045765‑3045915 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcAGCACCGCCAGCGCCACGCCGC‑CTGCCGGTGCCGAGTAGGTACCGGTGGTCATCACCACCAAGGCGTAGGCAAACACCCCGGCCAGGATCGATGGCAGGCCAGTGAGCATCTTGGCGGCAAAGCGCGCAGC < NC_002947/3045948‑3045818 TCCTGGCAGCGGTGTTCCTGGCCGAACTCGGCCCCGACAGCAAACTGGCCAACGCTGCGCGCTTTGCCGCCAAGATGCTCACTGGCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACT > 1:1025315/1‑150 CCTGGCAGCGGTGTTCCTGGCCGAACTCGGCCCCTACAGCAAACTGGCCAACGCTGCGCGCTTTGCCGCCAAGATGCTCACTGGCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTC < 1:1867355/150‑1 CCCGACAGCAAACTGGCCAACGCTGCGCGCTTTGCCGCCAAGATGCTCACTGGCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTCGGCACCGCCAGCGCCACGCCGC‑CTGCCG < 1:1985927/147‑1 CCCGACAGCAAACTGGCCAACGCTGCGCGCTTTGCCGCCAAGATGCTCACTGGCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTCGGCACCGCCAGCGCCACGCCGC‑CTGCCG > 2:1985927/1‑147 GCAAACTGGCCAACGCTGCGCGCTTTGCCGCCAAGATGCTCACTGGCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTCGGCACCGCCAGCGCCACGCCGC‑CTGCCGGTGCCGA < 1:2156112/147‑1 GCAAACTGGCCAACGCTGCGCGCTTTGCCGCCAAGATGCTCACTGGCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTCGGCACCGCCAGCGCCACGCCGC‑CTGCCGGTGCCGA > 2:2156112/1‑147 GCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTCAGCACCGCCAGCGCCACGCCGC‑CTGCCGGTGCCGAGTAG > 1:656380/1‑106 GCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTCAGCACCGCCAGCGCCACGCCGC‑CTGCCGGTGCCGAGTAG < 2:656380/106‑1 GCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTCAGCACCGCCAGCGCCACGCCGC‑CTGCCGGTGCCGAGTAG < 1:1555076/102‑1 GCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTCAGCACCGCCAGCGCCACGCCGC‑CTGCCGGTGCCGAGTAG > 2:1555076/1‑102 CACCGGTACCTACTCGGCACCGGCAG‑GCGGCGTGGCGCTGGCGGTGCTGAGTAGGTACCGGTGGTCATCACCACCAAGGCGTAGGCAAACACCCCGGCCAGGATCGATGGCAGGCCAGTGAGCATCTTGGCGGCAAAGCGCGCAGC > 1:2502309/1‑146 CACCGGTACCTACTCGGCACCGGCAG‑GCGGCGTGGCGCTGGCGGTGCTGAGTAGGTACCGGTGGTCATCACCACCAAGGCGTAGGCAAACACCCCGGCCAGGATCGATGGCAGGCCAGTGAGCATCTTGGCGGCAAAGCGCGCAGC < 2:2502309/146‑1 TCCTGGCAGCGGTGTTCCTGGCCGAACTCGGCCCCGACAGCAAACTGGCCAACGCTGCGCGCTTTGCCGCCAAGATGCTCACTGGCCTGCCATCGATCCTGGCCGGGGTGTTTGCCTACGCCTTGGTGGTGATGACCACCGGTACCTACTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3045765‑3045915 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcAGCACCGCCAGCGCCACGCCGC‑CTGCCGGTGCCGAGTAGGTACCGGTGGTCATCACCACCAAGGCGTAGGCAAACACCCCGGCCAGGATCGATGGCAGGCCAGTGAGCATCTTGGCGGCAAAGCGCGCAGC < NC_002947/3045948‑3045818 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |