New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3151447 = | 116 (1.010) | 7 (0.060) | 7/234 | NT | 5.9% | coding (368/834 nt) | PP_2767 | ABC transporter ATP‑binding protein |
? | NC_002947 | 3151478 = | 112 (1.020) | coding (399/834 nt) | PP_2767 | ABC transporter ATP‑binding protein |
CGAGGCTCGGCGGCCAGCGCACGGGCCAGCTCGATCCGCTTCTGCAGGCCATAGGGCAAGGTGCCAACGATTTCGTCACGCCACGGCTGGATGCGCAGAAACTCGATTACCCGCTCGGCGGCGGCGCGTTGGCGATCGTCCTCGCCCGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3151600‑3151447 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcCGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTGCGCTGGCCGCCGAGCCTCGCCTGCTGCTGCTCGACGAGCCGAT > NC_002947/3151478‑3151624 CGAGGCTCGGCGGCCAGCGCACGGGCCAGCTCGATCCGCTTCTGCAGGCCATAGGGCAAGGTGCCAACGATTTCGTCACGCCACGGCTGGATGCGCAGAAACTCGATTACCCGCTCGGCGGCGGCGCGTTGGCGATCGTCCTCGCCCGGC < 2:1669674/150‑1 GAGGCTCGGCGGCCAGCGCACGGGCCAGCTCGATCCGCTTCTGCAGGCCATAGGGCAAGGTGCCAACGATTTCGTCACGCCACGGCTGGATGCGCAGAAACTCGATTACCCGCTCGGCGGCGGCGCGTTGGCGATCGTCCTCGCCCGGCG > 2:2498522/1‑150 GAGGCTCGGCGGCCAACGCACGGGCCAGCTCGATCCGCTTCTGCAGGCCATAGGGCAAGGTGCCAACGATTTCGTCACGCCACGGCTGGATGCGCAGAAACTCGATTACCCGCTCGGCGGCGGCGCGTTGGCGATCGTCCTCGCCCGGCG > 1:1504244/1‑150 GCTCGGCGGCCAGCGCACGGGCCAGCTCGATCCGCTTCTGCAGGCCATAGGGCAAGGTGCCAACGATTTCGTCACGCCACGGCTGGATGCGCAGAAACTCGATTACCCGCTCGGCGGCGGCGCGTTGGCGATCGTCCTCGCCCGGCGCGC > 1:388532/1‑150 ACCCGCTCGGCGGCGGCGCGTTGGCGATCGTCCTCGCCCGGCGCGCGGCCGATGCGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTG > 2:1137078/1‑150 CTCGGCGGCGGCGCGTTGGCGATCGTCCTCGCCCGGCGCGCGGCCGATGCGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTGCGCTG < 1:1137078/150‑1 GGCGGCGCGTTGGCGATCGTCCTCGCCCGGCGCGCCGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTGCGCTGGCCGCC > 1:2295535/1‑150 GGCGCGTTGGCGATCGTCCTCGCCCGGCGCGCCGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGG < 1:2351396/120‑1 GGCGCGTTGGCGATCGTCCTCGCCCGGCGCGCCGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGG > 2:2351396/1‑120 GCGCGTTGGCGATCGTCCTCGCCCGGCGCGCGGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTAT > 1:589907/1‑104 GCGCGTTGGCGATCGTCCTCGCCCGGCGCGCGGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTAT < 2:589907/104‑1 GCGCCGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTGCGCTGGCCGCCGAGCCTCGCCTGC > 1:2261469/1‑132 GCGCCGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTGCGCTGGCCGCCGAGCCTCGCCTGC < 2:2261469/132‑1 GCGCCGCCGCCGAGCGGGTAATCGAGTTTCTCTCTTTCCATCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTGCGCTGGCCGCCGAGCCTCGCCTGCTGCTGCTCGACGAGCCGA < 2:2548132/150‑1 CGCCGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGCAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTGCGCTGGCCGCCGAGCCTCGCCTGCTGCTGCTCGACGACCCGAT > 1:1015197/1‑150 CGCCGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTGCGCTGGCCGCCGAGCCTCGCCTGCTGCTGCTCGACGAGCCGAT < 1:460934/150‑1 CGAGGCTCGGCGGCCAGCGCACGGGCCAGCTCGATCCGCTTCTGCAGGCCATAGGGCAAGGTGCCAACGATTTCGTCACGCCACGGCTGGATGCGCAGAAACTCGATTACCCGCTCGGCGGCGGCGCGTTGGCGATCGTCCTCGCCCGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3151600‑3151447 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcCGCCGCCGAGCGGGTAATCGAGTTTCTGCGCATCCAGCCGTGGCGTGACGAAATCGTTGGCACCTTGCCCTATGGCCTGCAGAAGCGGATCGAGCTGGCCCGTGCGCTGGCCGCCGAGCCTCGCCTGCTGCTGCTCGACGAGCCGAT > NC_002947/3151478‑3151624 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |