| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3588140 = | 85 (0.740) | 6 (0.060) | 6/204 | NT | 10.7% | intergenic (+18/‑57) | catA‑II/benE‑II | catechol 1,2‑dioxygenase/benzoate transport protein |
| ? | NC_002947 | 3588208 = | 29 (0.300) | coding (12/1272 nt) | benE‑II | benzoate transport protein | |||||
CCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3588302‑3588140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagcgggcatgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTTGGTGA > NC_002947/3588208‑3588356 CCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGTGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 1:2392396/150‑1CCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 1:2986904/150‑1CCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 1:116263/150‑1CCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 2:2418999/150‑1CCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 1:1604812/150‑1 ACAGAGCAGTCCTTGATCAGCGTTTTCATTAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATG > 2:2812893/1‑150 ACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGG < 1:1114426/139‑1 ACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGG > 2:1114426/1‑139 GAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCC < 2:2025704/150‑1 CAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGA < 1:1880497/135‑1 CAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGA > 2:1880497/1‑135 TTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 2:794351/123‑1 TTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG > 1:794351/1‑123 TCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCC > 1:169849/1‑118 TCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCC < 2:169849/118‑1 TCGAAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCAT < 2:632875/112‑1 TCGAAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCAT > 1:632875/1‑112 GGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGC > 2:1386902/1‑94 GGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGC < 1:1386902/94‑1 TTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG > 2:198023/1‑88 TTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 1:198023/88‑1 TTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGC > 2:2378175/1‑76 TTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGC < 1:2378175/76‑1 GTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGG < 2:979878/58‑1 GTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGG > 1:979878/1‑58 TTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGC > 1:38885/1‑119 TTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGC < 2:38885/119‑1 GCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCC > 2:989342/1‑150 AACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAA < 2:1594097/63‑1 AACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAA > 1:1594097/1‑63 GCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCC < 1:989342/150‑1 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCT > 1:557254/1‑150 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGC > 1:1371606/1‑115 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGC < 2:1371606/115‑1 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATC < 2:1155685/95‑1 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATC > 1:1155685/1‑95 GCATGCCCGCGAAGCAGCCAACACCCAAACAAGAACCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAA < 2:2022074/69‑1 GCATGCCCGCGAAGCAGCCAACACCCAAACAAGAACCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAA > 1:2022074/1‑69 TGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGC < 1:2927924/81‑1 TGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGC > 2:2927924/1‑81 CCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGT > 2:2915140/1‑150 CCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGT > 1:853660/1‑150 CGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTT > 1:1348740/1‑150 CGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTCCGCGCCAACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTT > 1:969386/1‑150 AGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTTGGTGA < 1:1013277/150‑1 CCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3588302‑3588140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagcgggcatgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTTGGTGA > NC_002947/3588208‑3588356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |