| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3971371 | NA (NA) | 4 (0.040) | 4/232 | NT | NA | coding (1246/1536 nt) | PP_3501 | transposase |
| ? | NC_002947 | = 3971411 | NA (NA) | coding (1286/1536 nt) | PP_3501 | transposase | |||||
CGAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3971217‑3971371‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGAC < NC_002947/3971411‑3971264 CGAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTA > 1:1293486/1‑150CGAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTA < 2:1678472/150‑1 GAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAACTCCTGCATCACTGGATGTGGGCCCAGCGCGACTTCGCCCATCACGGACCAACCACGGCTAAAGCCCTCGATTAC > 1:2361090/1‑150 GAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTAC > 1:243510/1‑150 GAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTAC > 1:2164015/1‑150 GAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTAC > 1:2044404/1‑150 AACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACA < 1:65627/150‑1 AACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACA < 2:2876637/150‑1 AACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACA < 1:3034699/150‑1 CGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGC < 1:857981/150‑1 CGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGC < 1:1662746/150‑1 GCCACGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCC > 2:978192/1‑150 TGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGC < 2:1011371/130‑1 TGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGC > 1:1011371/1‑130 CTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGA < 1:2223452/137‑1 CTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGA > 2:2223452/1‑137 CAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCC < 2:2524529/83‑1 CAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCC > 1:2524529/1‑83 CGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAAT < 1:339188/101‑1 CGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAAT > 2:339188/1‑101 ACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCC < 1:1576779/150‑1 ACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCC > 1:303908/1‑150 ACAGCCCCATCGTCCAGGTAGCGCGTAAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGAACCGCCATTTCC > 2:772545/1‑150 CAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCT < 2:2424257/150‑1 CAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATG < 2:483928/118‑1 CAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATG > 1:483928/1‑118 AGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTG < 2:1257418/150‑1 AGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTG < 1:2918008/150‑1 tgCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGA < 2:2081838/148‑1 GCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGA < 2:1490131/150‑1 GCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGA < 2:456133/150‑1 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGAC < 2:831816/150‑1 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGAC > 1:1736778/1‑150 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGAC > 2:1574973/1‑150 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGAT > 2:1707968/1‑74 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGAT < 1:1707968/74‑1 CCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAAAGCAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGAC < 1:1723902/150‑1 CCCCAGCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGCCATGCAGTGTTTTGAGGATTGGCACCGCCATTTC < 1:1656273/145‑1 CCCCAGCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGCCATGCAGTGTTTTGAGGATTGGCACCGCCATTTC > 2:1656273/1‑145 CGAACGCCAAGCGCGGGACATGAGTGATGAAGATCGTTGGCGAATACGTCAGGAAATGGCGGTGCCAATCCTCAAAACACTGCATGACTGGATGTTGGCCCAGCGCGACTTGGTGCCCAACGGATCAGCCACGGCTAAAGCCCTCGATTACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3971217‑3971371‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagccCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAGTCGCGCTGGGCCAACATCCAGTCATGCAGTGTTTTGAGGATTGGCACCGCCATTTCCTGAC < NC_002947/3971411‑3971264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |