| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4034883 = | 77 (0.670) | 4 (0.040) | 4/228 | NT | 5.6% | intergenic (‑136/‑111) | PP_3556/PP_3557 | membrane protein/methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 4034946 = | 64 (0.600) | intergenic (‑199/‑48) | PP_3556/PP_3557 | membrane protein/methyl‑accepting chemotaxis transducer | |||||
AGCAGGGTGATCTTCCACTGGATGGAAAGTTGTCGCAAAGGCATGGGGGCGGATCCCTTTTTGGCAATAAGGGTTATGGCTGTATCTGCGGTGGGGCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCGGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4035037‑4034883‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccccACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATCGTCACCTTGCTCGTCGGCCTGTCGCTGT > NC_002947/4034946‑4035090 AGCAGGGTGATCTTCCACTGGATGGAAAGTTGTCGCAAAGGCATGGGGGCGGATCCCTTTTTGGCAATAAGGGTTATGGCTGTATCTGCGGTGTGGCCTGCAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCG < 1:1755205/150‑1 GGTGATCTTCCACTGGATGGAAAGTTGTCGCAAAGGCATGGGGGCGGATCCCTTTTTGGCAATAAGGGTTATGGCTGTATCTGCGGTGGGGCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCGGCCCC > 2:2784965/1‑150 ACTGGATGGAAAGTTGTCGCAAAGGCATGGGGGCGGATCCCTTTTTGGCAATAAGGGTTATGGCTGTATCTGCGGTGGGGCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCG < 1:2439438/134‑1 ACTGGATGGAAAGTTGTCGCAAAGGCATGGGGGCGGATCCCTTTTTGGCAATAAGGGTTATGGCTGTATCTGCGGTGGGGCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCG > 2:2439438/1‑134 TGGGGGCGGATCCCTTTTTGGCAATAAGGGTTATGGCTGTATCTGCGGTGGGGCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCGGCCC < 2:2852758/111‑1 TGGGGGCGGATCCCTTTTTGGCAATAAGGGTTATGGCTGTATCTGCGGTGGGGCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCGGCCC > 1:2852758/1‑111 TGCGGTGGGGCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCGGCCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTT > 1:2730452/1‑135 TGCGGTGGGGCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCGGCCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTT < 2:2730452/135‑1 GCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCGGCCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTG > 1:1089820/1‑117 GCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCGGCCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTG < 2:1089820/117‑1 TCGGCCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATCGTCACCTTGCTCGTCGGCCTGTCGC > 1:2082775/1‑150 GCCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATCGTCACCTTGCTCGTCGGCCTGTCGCTGT > 1:556122/1‑150 GCCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACC < 1:964117/92‑1 GCCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACC > 2:964117/1‑92 CCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATC > 1:3038088/1‑121 CCCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATC < 2:3038088/121‑1 CCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATCGTCACCTTGC < 2:1667020/130‑1 CCCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATCGTCACCTTGC > 1:1667020/1‑130 CCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATCGTCACC < 2:1266902/125‑1 CCACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATCGTCACC > 1:1266902/1‑125 AGCAGGGTGATCTTCCACTGGATGGAAAGTTGTCGCAAAGGCATGGGGGCGGATCCCTTTTTGGCAATAAGGGTTATGGCTGTATCTGCGGTGGGGCCGAGAGGTGCCAAAGCGCTCCGGCCAGGCACCTCGCTGCCTCCCACAATATCGGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4035037‑4034883‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccccACCGCAGATACAGCCATAACCCTTATTGCCAAAAAGGGATCCGCCCCCATGCCTTTGCGACAACTTTCCATCCAGTGGAAGATCACCCTGCTCGCCGGTCTCTGTCTGGCCGCTATCGTCACCTTGCTCGTCGGCCTGTCGCTGT > NC_002947/4034946‑4035090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |