New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4054008 | 116 (1.010) | 7 (0.060) | 7/230 | NT | 6.2% | coding (538/1320 nt) | PP_3573 | monooxygenase |
? | NC_002947 | = 4054033 | 101 (0.940) | coding (563/1320 nt) | PP_3573 | monooxygenase |
GCGTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4053853‑4054008 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcgCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCG < NC_002947/4054033‑4053995 GCGTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTT > 2:2890493/1‑150 AGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGG < 2:2719463/150‑1 GTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGC < 2:1533157/150‑1 GTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGC < 2:2281514/150‑1 TCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAA < 1:1771051/150‑1 CGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAG < 2:706545/150‑1 CCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCACTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCGTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCG < 2:1824922/150‑1 ATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCCTCAGCTCTTCGGCAATCTGCAC < 2:906351/135‑1 ATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCAC > 1:906351/1‑135 CCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCC > 1:152689/1‑85 CCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCC < 2:152689/85‑1 GCGTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4053853‑4054008 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcgCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCG < NC_002947/4054033‑4053995 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |