New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4171431 =97 (0.850)6 (0.050) 6/234 NT 6.1% coding (736/879 nt) PP_3670 DMT superfamily permease
?NC_002947 4171450 = 91 (0.830)coding (717/879 nt) PP_3670 DMT superfamily permease

CACCTTGGCAATGAGTGCGCTGGTGCCGTTCTTCTGGGAGGTGCCGCGCTGGGATCATGCCCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCGGCGTTGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4171582‑4171431
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGCCAAAGCCGCCCAGTGCCAGCATCAACAGGGCATGATCCCAGCGCGGCACCTCCCAGAAGAACGGCACCAGCGCACTCATTGCCAA  >  NC_002947/4171450‑4171578
                                                                                                                                                                                                                                                                                         
CACCTTGGCAATGAGTGCGCTGGTGCCGTTCTTCTGGGAGGTGCCGCGCTGGGATCATGCCCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCGGCGTTGCTGGC                                                                                                                                     >  2:2345810/1‑150
                                                            CCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCAGCAACGCCGGCGCTGCATG                                                                                                                             >  1:470559/1‑98
                                                            CCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCAGCAACGCCGGCGCTGCATG                                                                                                                             <  2:470559/98‑1
                                                                                                                                 TGCAGCGCCGGCGTTGCTGGCGCTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGCCAAAGCCGCCCAGTGCCAGCATCAACAGGGCATGATCCCAGCGCGGCACCTCCCAGAAGAACGGCACCAGCGCACTCATTGCC    >  1:186220/1‑150
                                                                                                                                   CAGCGCCGGCGTTGCTGGCGCTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGCCAAAGCCGCCCAGTGCCAGCATCAACAGGGCATGATCCCAGCGCGGCACCTCCCAGAAGAACGGCACCAGCGCACTCATTGCCAA  <  2:186220/150‑1
                                                                                                                                    AGCGCCGGCGTTGCTGGCGCTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGC                                                                                       >  1:1543794/1‑64
                                                                                                                                    AGCGCCGGCGTTGCTGGCGCTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGC                                                                                       <  2:1543794/64‑1
                                                                                                                                                                                                                                                                                         
CACCTTGGCAATGAGTGCGCTGGTGCCGTTCTTCTGGGAGGTGCCGCGCTGGGATCATGCCCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCGGCGTTGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4171582‑4171431
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGCCAAAGCCGCCCAGTGCCAGCATCAACAGGGCATGATCCCAGCGCGGCACCTCCCAGAAGAACGGCACCAGCGCACTCATTGCCAA  >  NC_002947/4171450‑4171578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.