New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4171431 = | 97 (0.850) | 6 (0.050) | 6/234 | NT | 6.1% | coding (736/879 nt) | PP_3670 | DMT superfamily permease |
? | NC_002947 | 4171450 = | 91 (0.830) | coding (717/879 nt) | PP_3670 | DMT superfamily permease |
CACCTTGGCAATGAGTGCGCTGGTGCCGTTCTTCTGGGAGGTGCCGCGCTGGGATCATGCCCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCGGCGTTGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4171582‑4171431 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGCCAAAGCCGCCCAGTGCCAGCATCAACAGGGCATGATCCCAGCGCGGCACCTCCCAGAAGAACGGCACCAGCGCACTCATTGCCAA > NC_002947/4171450‑4171578 CACCTTGGCAATGAGTGCGCTGGTGCCGTTCTTCTGGGAGGTGCCGCGCTGGGATCATGCCCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCGGCGTTGCTGGC > 2:2345810/1‑150 CCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCAGCAACGCCGGCGCTGCATG > 1:470559/1‑98 CCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCAGCAACGCCGGCGCTGCATG < 2:470559/98‑1 TGCAGCGCCGGCGTTGCTGGCGCTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGCCAAAGCCGCCCAGTGCCAGCATCAACAGGGCATGATCCCAGCGCGGCACCTCCCAGAAGAACGGCACCAGCGCACTCATTGCC > 1:186220/1‑150 CAGCGCCGGCGTTGCTGGCGCTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGCCAAAGCCGCCCAGTGCCAGCATCAACAGGGCATGATCCCAGCGCGGCACCTCCCAGAAGAACGGCACCAGCGCACTCATTGCCAA < 2:186220/150‑1 AGCGCCGGCGTTGCTGGCGCTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGC > 1:1543794/1‑64 AGCGCCGGCGTTGCTGGCGCTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGC < 2:1543794/64‑1 CACCTTGGCAATGAGTGCGCTGGTGCCGTTCTTCTGGGAGGTGCCGCGCTGGGATCATGCCCTGTTGATGCTGGCACTGGGCGGCTTTGGCATGACTGCGCACCTGCTGTTGACCCAGGCCTTCCGCCATGCAGCGCCGGCGTTGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4171582‑4171431 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTGCATGGCGGAAGGCCTGGGTCAACAGCAGGTGCGCAGTCATGCCAAAGCCGCCCAGTGCCAGCATCAACAGGGCATGATCCCAGCGCGGCACCTCCCAGAAGAACGGCACCAGCGCACTCATTGCCAA > NC_002947/4171450‑4171578 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |