| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4224393 | 65 (0.570) | 34 (0.300) | 31/242 | NT | 34.5% | intergenic (‑461/+360) | PP_3703/PP_3704 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 4538286 | NA (NA) | intergenic (+44/‑276) | PP_4025/PP_4027 | transposase/hypothetical protein | |||||
ACACCTTTAGAACACACTATGTTGTGCAAGGCTTGATATAAAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4224259‑4224393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGGCGCAGCCACGTATA < NC_002947/4538286‑4538138 ACACCTTTAGAACACACTATGTTGTGCAATGCTTGAGATAAAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAA > 2:1388782/1‑150 CTTTAGAACACACTATGTTGTGCAAGGCTTGATATAAAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCC > 2:2127427/1‑150 TTAGAACACACTATGTTGTGCAAGGCTTGATATAAAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCTATCCATGAACCCCAC > 2:1247158/1‑150 CACACTATGTTGTGCAAGGCTTGATATAAAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCA < 2:3054547/150‑1 GCAAGGCTTGATATAAAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCC > 2:1078234/1‑150 CAAGGCTTGATATAAAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCA > 2:1659843/1‑150 TATAAAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGT < 1:1003792/150‑1 AAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGG > 2:1752505/1‑127 AAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGG < 1:1752505/127‑1 TATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAG < 2:988707/126‑1 TATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAG > 1:988707/1‑126 TGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAA > 1:1771244/1‑150 TTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATG < 1:1873942/150‑1 CATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACGCTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGC > 1:2926372/1‑150 CAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTAC > 2:2097768/1‑91 CAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTAC < 1:2097768/91‑1 CTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCT < 1:1078234/150‑1 CTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCT > 1:1779375/1‑150 TTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTC < 1:1388782/150‑1 CTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATG > 2:1106430/1‑150 TCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGA > 1:2875867/1‑150 TCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTA < 2:1482448/135‑1 TCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTA > 1:1482448/1‑135 TCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAA < 2:526237/86‑1 TCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAA > 1:526237/1‑86 TCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGC < 2:956005/82‑1 TCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGC > 1:956005/1‑82 CTTGTTGAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAG < 1:1106430/150‑1 GAACGATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTC < 1:2127427/150‑1 ATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAA < 1:1534682/57‑1 ATGGAGATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAA > 2:1534682/1‑57 ATTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGGC < 2:1605821/150‑1 TTCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGGCG > 2:2156128/1‑150 TCCGTATGACAGTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTGCTTGGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGGCGC > 2:862921/1‑150 CAGTAACCGATCCATGAACCCCACCTACCCCAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGCCGTGCGGCAGTCGCTCCAGGACGTGGCGCAGCCACGTA < 2:1779375/150‑1 GTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGGCGCAGCCACGTATA < 2:2197505/150‑1 GTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGGCGCAGCCACGTATA > 2:1721114/1‑150 GTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGGCGCAGCCACGTATA > 2:440763/1‑150 ACACCTTTAGAACACACTATGTTGTGCAAGGCTTGATATAAAAACACTATATGCTGTGCTTTTCATGATCAGCTTGCAGCTTACAGAAGACCTCGAAATTCACACTTGTTGAACGATGGAGATTCCGTATGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4224259‑4224393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTAACCGATCCATGAACCCCACCTACCACAAGGTGGAAGCCAAAGTTACCGTGGCATCTCTGGCGAACAGTTCCATGGCAGCAGCGCTTCGTAGTCTGCTACCGATGAGGCGTGCGGCAGTCGCTCCAGGACGTGGCGCAGCCACGTATA < NC_002947/4538286‑4538138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |