| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4344327 = | 53 (0.460) | 7 (0.070) | 7/206 | NT | 13.1% | intergenic (+14/‑142) | PP_3817/PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein |
| ? | NC_002947 | 4344385 = | 48 (0.500) | intergenic (+72/‑84) | PP_3817/PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein | |||||
AGCAGCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4344494‑4344327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatctggcaggcgctgcaCTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCTGCA > NC_002947/4344385‑4344533 AGCAGCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTC < 1:510890/150‑1 AGCAAGACAAGCAGTCGGAGCATGCCGGGTGCCCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGAT < 1:1231096/150‑1 GCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATC < 2:2781065/150‑1 GCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATC < 2:2298863/150‑1 CAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATTATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCT < 2:2563423/150‑1 CAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCT > 1:290572/1‑150 AAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTG < 1:199439/150‑1 AAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTG > 1:1089809/1‑150 GACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGC < 2:1085463/150‑1 tCAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGCGCCGCGCGGGCGGTGCTCGATCTGGCA < 1:2385017/149‑1 ACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCA < 2:2440228/150‑1 AAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCGCTGGGTGAACTCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGa > 2:2385017/1‑149 TGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTG < 2:1363189/127‑1 TGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTG > 1:1363189/1‑127 GCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGC < 1:2908727/90‑1 GCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGC > 2:2908727/1‑90 CAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATC > 1:2735568/1‑42 CAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATC < 2:2735568/42‑1 CCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCT > 2:839302/1‑150 TCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCA < 1:2494082/113‑1 TCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCA > 2:2494082/1‑113 TGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACAT < 1:2692431/66‑1 TGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACAT > 2:2692431/1‑66 CGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACC > 2:589367/1‑146 CGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACC < 1:589367/146‑1 GATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGT > 2:1935465/1‑119 GATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGT < 1:1935465/119‑1 TGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCcc > 2:1456557/1‑84 TGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCAC < 1:1456557/86‑1 GGCAGGCGCTGCACTCTTGCAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGC < 2:65367/150‑1 GGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGC < 2:1063666/150‑1 GGCACGCGCTGTACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCATGCTACCACTCGCGACCCTGGC < 2:219424/150‑1 GCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCT > 2:2082995/1‑150 GCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCA < 1:66195/97‑1 GCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCA > 2:66195/1‑97 GGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAG > 2:1853527/1‑150 GCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGG > 1:137578/1‑144 GCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGG < 2:137578/144‑1 GCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATG > 2:359560/1‑76 GCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATG < 1:359560/76‑1 TGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCT < 1:2082995/150‑1 TGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCA > 1:668070/1‑75 TGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCA < 2:668070/75‑1 ACTATTGGAGGCGTACGCCCCGTCACATTATAATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCTGCA < 1:2563423/150‑1 AGCAGCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4344494‑4344327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatctggcaggcgctgcaCTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCTGCA > NC_002947/4344385‑4344533 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |