| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4577865 | 108 (0.940) | 9 (0.080) | 6/234 | NT | 7.6% | intergenic (+30/+79) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme |
| ? | NC_002947 | = 4577907 | 115 (1.050) | intergenic (+72/+37) | PP_4057/glgB | membrane protein/1,4‑alpha‑glucan branching enzyme | |||||
GGGCTGGTGGCGCGGGTGACGCCTTCGGTGGCGTTGTTCGTCAGCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4577713‑4577865‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCCACATCACTGCTGTAATC < NC_002947/4577907‑4577761 GGGCTGGTGGCGCGGGTGACGCCTTCGGTGGCGTTGTTCGTCAGCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAAC < 2:2391717/150‑1 GCTGGTGGCGCGGGTGACGCCTTCGGTGGCGTTGTTCGTCAGCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCC > 2:1853037/1‑150 GCGTTGTTCGTCAGCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACC > 1:2099399/1‑121 GCGTTGTTCGTCAGCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACC < 2:2099399/121‑1 CCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGG‑AGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCG < 2:2040330/150‑1 GCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGG < 1:2837850/143‑1 GCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGG > 2:2837850/1‑143 GATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCC > 1:903704/1‑86 GATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCC < 2:903704/86‑1 CAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGG‑AGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTA > 1:507582/1‑107 CAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGG‑AGACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTA < 2:507582/107‑1 ctgGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTAC < 2:86541/102‑1 CTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTAC > 1:86541/1‑105 GGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGC > 1:657092/1‑69 GGCCGGCCCCTTCGCGGGTAAACCCGCTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGC < 2:657092/69‑1 CCCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCCACATCACTGCTGTAAT > 1:453400/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCCACATCACTGCTGTAATC > 2:1400970/1‑150 CCGTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCCACATCACTGCTGTAATC < 1:655699/150‑1 GGGCTGGTGGCGCGGGTGACGCCTTCGGTGGCGTTGTTCGTCAGCGCCGATTACAGCAGTGATGTGGATGACAATGACCTGAACGGGTTGATTGGCAGCCTTGGGGTGCGGATGCGGTGGTAGGCAGGGCCGGCCCCTTCGCGGGTAAACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4577713‑4577865‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgTTCCTACGCAGGCACCGCACCCGGCGGTGACCCGTGTAGGAGCGGGTTTACCCGCGAAGGGGCCGGCCCTGCCTACCACCGCATCCGCACCCCAAGGCTGCCAATCAACCCGTTCAGGTCATTGTCATCCACATCACTGCTGTAATC < NC_002947/4577907‑4577761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |