| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4649318 | 107 (0.930) | 6 (0.050) | 6/234 | NT | 5.5% | coding (1642/1710 nt) | PP_4113 | hypothetical protein |
| ? | NC_002947 | = 4649332 | 103 (0.940) | coding (1628/1710 nt) | PP_4113 | hypothetical protein | |||||
GGCTTCCTGTGGTGCAGTCCTGACGGACGTTAGAAAAACGAGAGGCGCGATGTTACGGAATTTGTCTGACAGCGGCCACCGCTCAACGCACCCGTTCCAGGCTCTGCACGGCCAGGTCCAGCGCACGCTGCATGTCCAGGCGCGCCGAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4649168‑4649318‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacgACCC‑GGACCTGGGCCGTTCGGCGCGCCTGGACATGCAGCGTGCGCTGGACCTGGCCGTGCAGAGCCTGGAACGGGTGCGTTGAGCGGTGGCCGCTGTCAGACAAATTCCGTAACATCGCGCCTCTCGTTTTTCTAACGTCCGTCAG < NC_002947/4649332‑4649187 GGCTTCCTGTGGTGCAGTCCTGACGGACCTTAGAAAAACGAGATGCGCTATGTTACGGAATTTGTCTGACAGCGGCCACGGCTCAACGCACCCGTTCCAGGCTCTGCACGGCCATGTCCAGCCCACGCTGCATGTCCAGGCGCGCCGAAC < 2:817845/150‑1 CTGCACGGCCAGGTCCAGCGCACGCTGCATGTCCAGGCGCGCCGAACGACCC‑GGACCTGGGCCGTTCGG > 1:1852117/1‑69 CTGCACGGCCAGGTCCAGCGCACGCTGCATGTCCAGGCGCGCCGAACGACCC‑GGACCTGGGCCGTTCGG < 2:1852117/69‑1 GCTGCATGTCCAGGCGCGCCGAACGGCCCAGGTCC‑GGGTCGTTCGGCGCGCCTGGACATGCAGCGTGCGCTGGACCTGGCCGTGCAGAGCCTGGAA < 1:420452/96‑1 GCTGCATGTCCAGGCGCGCCGAACGGCCCAGGTCC‑GGGTCGTTCGGCGCGCCTGGACATGCAGCGTGCGCTGGACCTGGCCGTGCAGAGCCTGGAA > 2:420452/1‑96 CAGGCGCGCTGAACGACCC‑GGACCTGGGCCGTTCGGCGCGCCTGGACATGCAGCGTGCGCTGGACCTGGCCGTGCAGAGCCTGGAACGGGTGCGTTGAGCGGTGGCCGCTGTCAGACAAATTCCGTAACATCGCGC < 1:874395/136‑1 CAGGCGCGCTGAACGACCC‑GGACCTGGGCCGTTCGGCGCGCCTGGACATGCAGCGTGCGCTGGACCTGGCCGTGCAGAGCCTGGAACGGGTGCGTTGAGCGGTGGCCGCTGTCAGACAAATTCCGTAACATCGCGC > 2:874395/1‑136 GAACGACCC‑GGACCTGGGCCGTTCGGCGCGCCTGGACATGCAGCGTGCGCTGGACCTGGCCGTGCAGAGCCTGGAACGGGTGCGTTGAGCGGTGGCCGCT < 1:2012917/100‑1 GAACGACCC‑GGACCTGGGCCGTTCGGCGCGCCTGGACATGCAGCGTGCGCTGGACCTGGCCGTGCAGAGCCTGGAACGGGTGCGTTGAGCGGTGGCCGCT > 2:2012917/1‑100 AACGACCC‑GGACCTGGGCCGTTCGGCGCGCCTGGACATGTAGCGTGCGCTGGACCTGGCCGTGCAGAGCCTGGAACGGGTGCGTTGAGCGGTGGCCGCTGTCAGACAAATTCCGTAACATCGCGCCTCTCGTTTTTCTAACGTCCGTCAG < 1:2941291/150‑1 GGCTTCCTGTGGTGCAGTCCTGACGGACGTTAGAAAAACGAGAGGCGCGATGTTACGGAATTTGTCTGACAGCGGCCACCGCTCAACGCACCCGTTCCAGGCTCTGCACGGCCAGGTCCAGCGCACGCTGCATGTCCAGGCGCGCCGAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4649168‑4649318‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacgACCC‑GGACCTGGGCCGTTCGGCGCGCCTGGACATGCAGCGTGCGCTGGACCTGGCCGTGCAGAGCCTGGAACGGGTGCGTTGAGCGGTGGCCGCTGTCAGACAAATTCCGTAACATCGCGCCTCTCGTTTTTCTAACGTCCGTCAG < NC_002947/4649332‑4649187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |