| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4675357 = | 40 (0.350) | 9 (0.100) | 7/198 | NT | 24.5% | intergenic (+10/+94) | PP_4137/chrR | outer membrane siderophore receptor/chromate reductase |
| ? | NC_002947 | 4675415 = | 23 (0.250) | intergenic (+68/+36) | PP_4137/chrR | outer membrane siderophore receptor/chromate reductase | |||||
AATGACAAGACGCGACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4675528‑4675357‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgcattcgcgggtaaacccgcTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCG > NC_002947/4675415‑4675560 AATGACAAGACGCGACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATG > 1:2731620/1‑150AATGACAAGACGCGACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATG < 2:2731620/150‑1 CAAGACGCGACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCA > 1:1000410/1‑150 tgagcggTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 2:2634952/143‑1 gcTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACTCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAA < 2:1053321/148‑1 GTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG > 2:1515775/1‑145 GTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 1:1515775/145‑1 TCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG > 1:1167887/1‑114 TCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 2:1167887/114‑1 GGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGT < 1:1435834/112‑1 GGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGT > 2:1435834/1‑112 TTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAAC > 2:2389192/1‑108 TTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAAC < 1:2389192/108‑1 AGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGT > 2:2873940/1‑98 AGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGT < 1:2873940/98‑1 CCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGG < 1:2848513/82‑1 CCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGG > 2:2848513/1‑82 GCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGC < 1:2305061/70‑1 GCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGC > 2:2305061/1‑70 GAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTGGCGTC > 1:195509/1‑150 GAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGG > 1:1607216/1‑77 GAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGG < 2:1607216/77‑1 AATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCT > 1:1774879/1‑150 AATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCA < 1:2427654/68‑1 AATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCA > 2:2427654/1‑68 GCAAATTCAATGACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGA < 2:1774879/150‑1 GACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAA < 1:739618/150‑1 ACGCATTCGCGGGTAAACCCGCTCCTACACAGGTGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGAAAGAACGGTCGCGTCTTGT > 1:848803/1‑132 ACGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGAAAGAACGGTCGCGTCTTGT < 2:848803/132‑1 CGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATC < 1:617971/150‑1 CGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCA > 2:112177/1‑133 CGCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCA < 1:112177/133‑1 GCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAA > 2:1054449/1‑92 GCATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAA < 1:1054449/92‑1 ATTCGCGTGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGGCGCGTCTTGTCATTGAGCTTGCCCGAATCCTC < 1:1053321/150‑1 ATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCC < 1:362594/148‑1 ATTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCC > 2:362594/1‑148 TTCGCGGGTAAACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCG > 2:817127/1‑150 AACCCGCTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTCAGCTTGCCCGAATCCTCGAACAAGCCCG > 2:23848/1‑150 CCGCTCCTACACAGGGGCGTTACACAGCAAGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACACATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCG > 2:826103/1‑150 AATGACAAGACGCGACCGTTCTTGCAGGCGTTTGTCGACAGGTTTGCGTCATGGGTGAAGTTGAACAGGGCGGTCTGAACCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4675528‑4675357‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgcattcgcgggtaaacccgcTCCTACACAGGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGAATCCTCGAACAAGCTCGCCG > NC_002947/4675415‑4675560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |