| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4890813 | 96 (0.840) | 6 (0.060) | 5/226 | NT | 6.0% | intergenic (+168/‑71) | glxR/ttuD | 2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase |
| ? | NC_002947 | = 4890835 | 99 (0.930) | intergenic (+190/‑49) | glxR/ttuD | 2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase | |||||
GCCTCACTGGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4890656‑4890813‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccctggAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGA < NC_002947/4890835‑4890687 GCCTCACTGGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCC < 2:790604/150‑1GCCTCACTGGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCC < 2:14289/150‑1 CCTCACTGGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCG > 2:1459078/1‑150 CTCACTGGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGC > 1:2200881/1‑150 CTCACTGGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGC < 1:2496895/150‑1 ACTGGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCC < 2:521496/150‑1 TCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGAACGCGGTCCCAATGGCAGCATTGATCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAAC < 2:885607/150‑1 TACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTTCAGGCCTAACCAG < 2:1978051/150‑1 TACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAG < 1:1459078/150‑1 AAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACGCCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGC < 1:960063/150‑1 GCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCC > 1:1454886/1‑54 GCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCC < 2:1454886/54‑1 CCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCT > 1:2394233/1‑88 CCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCT < 2:2394233/88‑1 CGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTT < 2:1180377/150‑1 GCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTT > 2:868966/1‑150 CCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTG < 2:202448/150‑1 CCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGG < 2:1593191/150‑1 CCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGG < 2:494596/150‑1 CCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGG < 1:987581/150‑1 CCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGACTGTGGTCGCAG > 1:2881157/1‑75 CCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGACTGTGGTCGCAG < 2:2881157/75‑1 CCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGG > 2:1738850/1‑38 CCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGG < 1:1738850/38‑1 CCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCtt < 2:154047/104‑3 CCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCtt > 1:154047/1‑102 CCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGAT > 2:2118433/1‑49 CCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGAT < 1:2118433/49‑1 CTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTA < 2:2738816/150‑1 GGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGG > 2:919530/1‑150 GAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGA > 1:2058516/1‑150 GCCTCACTGGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4890656‑4890813‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccctggAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGA < NC_002947/4890835‑4890687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |