| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4893598 = | 35 (0.310) | 10 (0.110) | 9/190 | NT | 29.7% | intergenic (+28/‑180) | pyk/PP_4302 | pyruvate kinase/urea transporter |
| ? | NC_002947 | 4893677 = | 20 (0.220) | intergenic (+107/‑101) | pyk/PP_4302 | pyruvate kinase/urea transporter | |||||
CAGTCAGTGGAGGTTGATGGGGGAGCGGTGGGCCTCTTTGGGCCTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4893773‑4893598‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCACGGC > NC_002947/4893677‑4893824 CAGTCAGTGGAGGTTGATGGGGGAGCGGTGGGCCTCTTTGGGCCTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGC < 2:1365889/150‑1CAGTCAGTGGAGGTTGATGGGGGAGCGGTGGGCCTCTTTGGGACTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGC < 1:662791/150‑1 TGGGGGAGCGGTGGGCCTCTTTGGGCCTTGGTTTTCCGCGGTCTGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCCCGTGCCAGCGTGGCCCTGTGGGAGCGGCtgt < 1:106630/150‑4 GGGGAGCGGTGGGCCTCTTTGGGCCTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGT < 2:2985952/150‑1 GAGCGGTGGGCCTCTTTGGGCCTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTC < 1:2692202/150‑1 GCGGTGGGCCTCTTTGGGCCTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTT < 2:2706324/143‑1 GCGGTGGGCCTCTTTGGGCCTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTT > 1:2706324/1‑143 CTCTTTGGGCCTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTT > 1:1735723/1‑134 CTCTTTGGGCCTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTT < 2:1735723/134‑1 TCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCG < 2:2836944/118‑1 TCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCG > 1:2836944/1‑118 GGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCT > 1:1296218/1‑106 GGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCT < 2:1296218/106‑1 AGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTG < 1:2019193/94‑1 AGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTG > 2:2019193/1‑94 AAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGT < 2:900488/63‑1 AAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGT > 1:900488/1‑63 AAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGC < 1:2686658/58‑1 AAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGC > 2:2686658/1‑58 GCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACC > 1:397593/1‑150 CCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCC > 1:2563428/1‑150 tCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCA > 2:1431408/2‑150 CACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCAC > 2:2442713/1‑150 ACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAG < 1:2493181/64‑1 ACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAG > 2:2493181/1‑64 AGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGA < 2:1647448/56‑1 AGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGA > 1:1647448/1‑56 CTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAC < 2:985510/86‑1 CTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAC > 1:985510/1‑86 CCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTA < 2:2563428/150‑1 CAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAA < 1:2442713/150‑1 CCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAA > 2:1804562/1‑150 TGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACC > 1:48340/1‑150 TGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCGCTGAATACCGCTCTACCCGACCGCTGAAAACCGCGGCCCAACGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCc > 1:2923822/1‑149 TGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCG > 1:1334633/1‑150 TGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGA < 1:414824/61‑1 TGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGA > 2:414824/1‑61 GGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAAT > 2:1958394/1‑137 GGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAAT < 1:1958394/137‑1 GCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGA > 2:848086/1‑150 GTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGC < 2:1770124/80‑1 GTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGC > 1:1770124/1‑80 TCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCA > 1:856495/1‑150 CGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCAC < 1:1804562/150‑1 CGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCAC > 1:1759723/1‑96 CGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCAC < 2:1759723/96‑1 GCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCACG > 1:220151/1‑150 GATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCACGGC > 1:1710437/1‑150 CAGTCAGTGGAGGTTGATGGGGGAGCGGTGGGCCTCTTTGGGCCTCGGTTTTCCGCGGTCGGGTAGAGCGGTATTCAGGGAGGGCTTTGCCCTCCAATCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4893773‑4893598‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcggccttgtgtcgcgaTTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCACCGCTCCCCCATCAACCTCCACTGACTGCCCCATGTACACCAAAAATTTCGTCAACCCGTGCCCCGACTGGGCCACGGC > NC_002947/4893677‑4893824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |