New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5105457 =	116 (1.010)	9 (0.080)	8/228	NT	7.7%	coding (2703/3021 nt)	ydiJ	putative oxidoreductase
	?	NC_002947	5105491 =	107 (1.000)					coding (2669/3021 nt)	ydiJ	putative oxidoreductase

TGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5105608‑5105457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcagcACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCG  >  NC_002947/5105491‑5105638                                                                                                                                                                                                                                                                                                              TGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCA                                                                                                                                                        >  2:2665155/1‑150   CCGCTGGTGGGGCTGGGCCCGGCGATGACGCTGGTGTAGCGCCAGGGGTGTCAGGAAGTGCCAGGCCTGGAGGGTTGCCGGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGC                                                                                                                                                      >  2:965277/1‑150                                                                                CCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGgc                                                                                                                                                     >  1:1346708/1‑72                                                                                CCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGgc                                                                                                                                                     <  2:1346708/74‑3                                                                                                              GATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCTCATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGA                                                                                    >  1:2680708/1‑109                                                                                                              GATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCTCATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGA                                                                                    <  2:2680708/109‑1                                                                                                               ATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGA                                                                                    <  2:1365220/108‑1                                                                                                               ATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGA                                                                                    >  1:1365220/1‑108                                                                                                                        CTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCGGCGTCATCGCCGGGTCCAGCCCCACCAGCGGC                                 >  1:2772797/1‑150                                                                                                                         TGCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCA                                >  1:1377204/1‑150                                                                                                                          GCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACC                                                                                                                     >  1:2847470/1‑64                                                                                                                          GCCCGAGCAGGCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACC                                                                                                                     <  2:2847470/64‑1                                                                                                                                    GCGCCTGCCGCACCGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCGGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCG                     <  2:2772797/150‑1                                                                                                                                           cctgagCGGCCAGAACATCCATCAACTATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACCTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGG              <  1:1240029/144‑1                                                                                                                                                 CGGGCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGA        <  2:1597751/150‑1                                                                                                                                                    GCAGCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCT     <  1:1515655/150‑1                                                                                                                                                       GCACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCG  >  1:2544852/1‑150                                                                                                                                                                                                                                                                                                              TGCCGCTGGTGGGGCTGGACCCGGCGATGACGCTGGTGTATCGCCAGGAGTATCAGAAAGTGCCAGGCCTGGAGGGTTGCCCGAAGGTGCTGCTGCCGCAGGAATGGTTGATGGATGTGCTGCCCGAGCAGGCGCCTGCCGCACCGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5105608‑5105457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcagcACATCCATCAACCATTCCTGCGGCAGCAGCACCTTCGGGCAACCCTCCAGGCCTGGCACTTTCTGATACTCCTGGCGATACACCAGCGTCATCGCCGGGTCCAGCCCCACCAGCGGCACACCGCAATCGGCCAGGGCCTTGAGCTGCG  >  NC_002947/5105491‑5105638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.