| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5318245 | 107 (0.930) | 6 (0.060) | 6/228 | NT | 5.4% | coding (1177/1725 nt) | ilvI | acetohydroxybutanoate synthase/acetolactate synthase |
| ? | NC_002947 | = 5318261 | 109 (1.020) | coding (1161/1725 nt) | ilvI | acetohydroxybutanoate synthase/acetolactate synthase | |||||
CCACGTCCTGATCCGGGAAGTTGAGCTTGACGCCCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAAGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5318089‑5318245‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtgacCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAACCGCTGGATCAACTCCGGTGGCCTGGGCACCATGGGCTTCGGCTTCCCGGCGGCGATGGGCGTCAAG < NC_002947/5318261‑5318114 CCACGTCCTGATCCGGGAAGTTGAGCTTGACGCCCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGG < 1:1425342/150‑1CCACGTCCTGATCCGGGAAGTTGAGCTTGACGCCCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGG > 2:750898/1‑150 ACGTCCTGATCCGGGAAGTTGAGCTTGACGCCCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAA < 1:815294/150‑1 ACGTCCTGATCCGGGAAGTTGAGCTTGACGCCCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAA > 2:2506178/1‑150 GTCCTGATCCGGGAAGTTGAGCTTGACGCCCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCCGTATTACTGCGTTGCAAACATCTTTTACTGGCCCACGTCGGAAGT < 2:2338779/150‑1 CCTGATCCGGGAAGTTGAGCTTGACGCCCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAAGTGA < 2:988328/150‑1 CCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAA < 1:2673272/119‑1 CCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAA > 2:2673272/1‑119 TTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAAGTGACCAATGGCGATGCCTTCGTCACTTCCGA < 2:1094290/104‑1 TTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAAGTGACCAATGGCGATGCCTTCGTCACTTCCGA > 1:1094290/1‑104 CAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAAGTGACCAATGGCGATGCCT > 2:900099/1‑85 CAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAAGTGACCAATGGCGATGCCT < 1:900099/85‑1 GCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAAGTGACCAATGGCGATGCCTTCGTCACTT < 1:1659577/74‑1 GCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAAGTGACCAATGGCGATGCCTTCGTCACTT > 2:1659577/1‑74 AAGTGACCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAACCGCTGGATCAACTCCGGTGGCCTGGGCACCATGGGCTTCGGCTTCCCGGCGGCGATGGGCG > 2:1452290/1‑150 AAGTGACCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAACCGCTGGATCAACTCCGGTAGACTGGACACCAGTGGCTTCGGCTTCCCGGCGGCGATGGGCG > 2:245996/1‑150 TGACCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAACCGCTGGATCAACTCCGGTGGCCTGGGCACCATGGGCTTCGGCTTCCCGGCGGCGATGGGCGTCA > 2:1269427/1‑150 ACCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAACCGCTGGATCAACTCCGGTGGCCTGGGCATCATGGGCTTCGGCTTCCCGGCGGCGATGGGCGTCAAG < 1:245996/150‑1 ACCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAACCGCTGGATCAACTCCGGTGGCCTGGGCACCATGGGCTTCGGCTTCCCGGCGGCGATGGGCGTCAAG > 1:742572/1‑150 ACCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAACCGCTGGATCAACTCCGGTGGCCTGGGCACCATGGGCTTCGGCTTCCCGGCGGCGATGGGCGTCAAG > 1:1186929/1‑150 ACCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAAC > 2:365198/1‑84 ACCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAAC < 1:365198/84‑1 CCACGTCCTGATCCGGGAAGTTGAGCTTGACGCCCATCGCCGCCGGGAAGCCGAAGCCCATGGTGCCCAGGCCACCGGAGTTGATCCAGCGGTTTGGCTTGTTGAAGCGGTAGTACTGCGCGGCAAACATCTGGTGCTGGCCCACGTCGGAAGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5318089‑5318245‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtgacCAATGGCGATGCCTTCGTCACTTCCGACGTGGGCCAGCACCAGATGTTTGCCGCGCAGTACTACCGCTTCAACAAGCCAAACCGCTGGATCAACTCCGGTGGCCTGGGCACCATGGGCTTCGGCTTCCCGGCGGCGATGGGCGTCAAG < NC_002947/5318261‑5318114 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |