| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5560797 | 105 (0.920) | 17 (0.170) | 13/218 | NT | 14.9% | intergenic (‑250/+52) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase |
| ? | NC_002947 | = 5560808 | 100 (0.980) | intergenic (‑261/+41) | hisZ/hflC | ATP phosphoribosyltransferase regulatory subunit/integral membrane ATP‑dependent zinc metallopeptidase | |||||
CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5560638‑5560797‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccccgcctggCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGG < NC_002947/5560808‑5560663 CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 1:2346490/1‑150CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 1:636093/1‑150CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 1:2910131/1‑150CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGCAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCA > 1:1870758/1‑150CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGACGATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAAGATGCA > 1:986068/1‑150 CAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCAC > 2:784146/1‑150 AGCGCAGCCACCGTACCCGCCACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACC > 1:96693/1‑150 AGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACC < 2:434022/150‑1 GCGGAGCCACCGTACCCGGCACACTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCC < 2:1264262/150‑1 CAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGC < 2:2364278/150‑1 CCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGACACACCCCGCCTG < 2:1653284/150‑1 AATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGG < 1:1219752/150‑1 AATTGCCTTGCGAGCCGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCCGGAAATTTCCCGGCTGCCTCATCATACCCCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGG < 2:986068/150‑1 cCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGC < 1:1211321/149‑1 GAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGG > 1:1204978/1‑139 GAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGG < 2:1204978/139‑1 GACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAAT > 2:84981/1‑147 GACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAAT < 1:84981/147‑1 AAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGG > 1:136906/1‑129 AAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGG < 2:136906/129‑1 AAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCT < 2:1695549/108‑1 AAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCT > 1:1695549/1‑108 AAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGAGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGG < 1:104368/130‑1 AAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGAGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGG > 2:104368/1‑130 GAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATGCA‑GCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTA > 1:2399763/1‑137 GAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATGCA‑GCGGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTA < 2:2399763/137‑1 AATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCAC < 1:2952498/78‑1 AATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCAC > 2:2952498/1‑78 AAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCAC > 1:1719974/1‑81 AAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCAC < 2:1719974/81‑1 GAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGT < 1:2718011/80‑1 GAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGGCAGCTAATGCACCAGGCGGGGT > 2:2718011/1‑80 ACCCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAA > 2:2539117/1‑150 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGCAAAGGGGGGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCGGCAAGGTTGATTCGCTCAGCGCCGATTGACGGTTTGGTCGGCTCGCAAGGCAAgt > 2:615204/1‑148 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCCATT > 2:2906495/1‑150 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATT < 1:2836513/150‑1 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATT > 2:2614512/1‑150 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTG < 1:2163729/131‑1 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTG > 2:2163729/1‑131 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCATCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATT > 2:96693/1‑150 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGG < 2:2896311/70‑1 CCCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGG > 1:2896311/1‑70 CCGCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAAGCAATTT > 1:180030/1‑150 GCCTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTcgg < 1:885677/150‑4 CTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGG < 1:2539117/150‑1 CTGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGG < 1:2614512/150‑1 TGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGA < 1:931570/147‑1 TGGCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGA > 2:931570/1‑147 CCAGCGCAGCCACCGTACCCGACACCCTCAAATTGCCTTGCGAGCTGACCAAACCGTCAACCGGCGCTGAGCCAATCAACCTTGCAGACGCAAAAAAGCCGGGAAATTTCCCGGCTGCCTCATCATACACCCCTTTTCATTCAGGATGCACCCCGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5560638‑5560797‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccccgcctggCAGCTAATGCACCAGGCGGGGTGCATCCTGAATGAAAAGGGGTGTATGATGAGGCAGCCGGGAAATTTCCCGGCTTTTTTGCGTCTGCAAGGTTGATTGGCTCAGCGCCGGTTGACGGTTTGGTCAGCTCGCAAGGCAATTTGAGG < NC_002947/5560808‑5560663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |