| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5571456 | 83 (0.730) | 6 (0.050) | 4/240 | NT | 6.0% | intergenic (+27/+114) | queG/yicG | epoxyqueuosine reductase/inner membrane protein |
| ? | NC_002947 | = 5571543 | 107 (0.950) | intergenic (+114/+27) | queG/yicG | epoxyqueuosine reductase/inner membrane protein | |||||
TTGGGCAATGCGCCCTCCACGATTCCGGTGATCGAGGCGCTGAAGGCCAGGCGTGACGATGAATCGGAATTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5571310‑5571456‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCA < NC_002947/5571543‑5571395 TTGGGCAATGCGCCCTCCACGATTCCGGTGATCGAGGCGCTGAAGGCCAGGCGTGACGATGAATCGGAATTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCATG > 2:2453873/1‑150 GCAATGCGCCCTCCACGATTCCGGTGATCGAGGCGCTGAAGGCCAGGCGTGACGATGAATCGGAATTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCGTGTGGG > 1:1680043/1‑150 AGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCC < 1:2453873/150‑1 GGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCT < 1:862319/118‑1 GGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCCATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCT > 2:862319/1‑118 TCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCgaa > 1:922277/1‑97 TCAGAGCATGCGCCATCCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCgaa < 2:922277/100‑4 CCATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCC > 1:1309178/1‑150 CATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCA > 2:128439/1‑150 TTGGGCAATGCGCCCTCCACGATTCCGGTGATCGAGGCGCTGAAGGCCAGGCGTGACGATGAATCGGAATTGGTGCGCGAGCATGTGGAGTGGGCGCTGGCCCGTCACGGAGCTCAATAGCGACCAGCCTCAGAGCATGCGCCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5571310‑5571456‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATTCCCTGTGTTGCCTGCTTCGCGGGCGCGCCCGCTCCCACAAGGATGGCGCATGCTCTGAGGCTGGTCGCTATTGAGCTCCGTGACGGGCCAGCGCCCACTCCA < NC_002947/5571543‑5571395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |