| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5762590 = | 116 (1.010) | 10 (0.090) | 8/230 | NT | 9.0% | intergenic (+50/‑91) | gpmI/PP_5057 | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase |
| ? | NC_002947 | 5762622 = | 93 (0.860) | intergenic (+82/‑59) | gpmI/PP_5057 | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase | |||||
TCATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5762742‑5762590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtttTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTGGAT > NC_002947/5762622‑5762770 TCATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCG > 2:2248423/1‑150TCATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCG > 2:1534413/1‑150 GGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGC > 2:2449704/1‑149 GGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGC < 1:2449704/149‑1 CCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTT > 2:2520233/1‑61 CCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTT < 1:2520233/61‑1 GCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTAC > 1:2515664/1‑88 GCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTAC < 2:2515664/88‑1 AAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTC > 1:2938887/1‑150 GCCTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGCGGGCCTACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTGTTGCCTGCTCAGCCCGGCCTTCGCCGATGAG > 1:772889/1‑150 CTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGC < 1:2197701/43‑1 CTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGC < 1:68150/43‑1 CTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGC > 2:2197701/1‑43 CTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGC > 2:68150/1‑43 GCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGTCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAAC > 1:897694/1‑150 CGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACT > 1:2080686/1‑150 GTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTG > 1:111919/1‑150 TTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTTTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTGG < 2:772889/150‑1 TTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGAC < 2:1735863/136‑1 TTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGAC > 1:1735863/1‑136 TTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCACGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGACTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTGG > 1:2942548/1‑150 TTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTGGAT < 1:1174523/150‑1 TCATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5762742‑5762590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtttTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTGGAT > NC_002947/5762622‑5762770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |