| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5922262 | 111 (0.970) | 6 (0.050) | 6/236 | NT | 5.0% | coding (2225/2874 nt) | gcvP‑II | glycine dehydrogenase |
| ? | NC_002947 | = 5922282 | 120 (1.080) | coding (2205/2874 nt) | gcvP‑II | glycine dehydrogenase | |||||
GGCTGGCCAGGTAGTTGGCCGAAAGGATAGCCACCTCGCTGGCGTCGGCCAGCTGCGGGCCCATCATGGCGATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5922110‑5922262‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagCCATCCGGTGGTGCCGGTGCCTGGGTTGGACCCGAACAACAGCGCGGTCAGCGCCGCGCCCTGGGGCAGCGCAAGCATCTTGCCGATCAGCTGGATGTACATCGCCATGATGGGCCCGCAGCTGGCCGACGCCAGCGAGGTGGCTATC < NC_002947/5922282‑5922135 GGCTGGCCAGGTAGTTGGCCGAAAGGATAGCCACCTCGCTGGCGTCGGCCAGCTGCGGGCCCATCATGGCGATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACC < 2:2790280/150‑1GGCTGGCCAGGTAGTTGGCCGAAAGGATAGCCACCTCGCTGGCGTCGGCCAGCTGCGGGCCCATCATGGCGATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACC < 1:1070758/150‑1 TGGCCAGGTAGTTGGCCGAAAGGATAGCCACCTCGCTGGCGTCGGCCAGCTGCGGGCCCATCATGGCGATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAG > 2:2605406/1‑150 CCCATCATGGCGATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCA < 2:2552931/93‑1 CCCATCATGGCGATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCA > 1:2552931/1‑93 TGGCGATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAGCCATCCGGTGGTGCCGGTGCCTGGGT < 1:538141/113‑1 TGGCGATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAGCCATCCGGTGGTGCCGGTGCCTGGGT > 2:538141/1‑113 ATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCA < 2:1412766/81‑1 ATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCA > 1:1412766/1‑81 ATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAG < 1:334683/76‑1 ATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAG > 2:334683/1‑76 TGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAGCCATCCGGTGGTGCCGGTGCCT < 1:2672028/91‑1 TGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAGCCATCCGGTGGTGCCGGTGCCT > 2:2672028/1‑91 CGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAGCCATCCGGTGGTGCCGGTGCCTGGG > 1:2138636/1‑90 CGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAGCCATCCGGTGGTGCCGGTGCCTGGG < 2:2138636/90‑1 CCAGCCATCCGGTGGTGCCGGTGCCTGGGTTGGACCCGAACAACAGCGCGGTCAGCGCCGCGCCCTGGGGCAGCGCAAGCATCTTGCCGATCAGCTGGATGTACATCGCCATGATGGGCCCGCAGCTGGCCGACGCCAGCGAGGTGGCTA > 1:2116098/1‑150 CAGCCATCCGGTGGTGCCGGTGCCTGGGTTGGACCCGAACAACAGCGCGGTCAGCGCCGCGCCCTGGGGCAGCGCAAGCATCTTGCCGATCAGCTGGATGTACATCGCCATGATGGGCCCGCAGCTGGCCGACGCCAGCGAGGTGGCTAT < 1:2350315/150‑1 CAGCCATCCGGTGGTGCCGGTGCCTGGGTTGGACCCGAACAACAGCGCGGTCAGCGCCGCGCCCTGGGGCAGCGCAAGCATCTTGCCGATCAGCTGGATGTACATCGCCATGATGGGCCCGCAGCTGGCCGACGCCAGCGAGGTGG < 2:1924009/146‑1 CAGCCATCCGGTGGTGCCGGTGCCTGGGTTGGACCCGAACAACAGCGCGGTCAGCGCCGCGCCCTGGGGCAGCGCAAGCATCTTGCCGATCAGCTGGATGTACATCGCCATGATGGGCCCGCAGCTGGCCGACGCCAGCGAGGTGG > 1:1924009/1‑146 AGCCATCCGGTGGTGCCGGTGCCTGGGTTGGACCCGAACAACAGCGCGGTCAGCGCCGCGCCCTGGGGCAGCGCAAGCATCTTGCCGATCAGCTGGATGTACATCGCCATGATGGGCCCGCAGCTGGCCGACGCCAGCGAGGTGGCTATC > 1:915026/1‑150 AGCCATCCGGTGGTGCCGGTGCCTGGGTTGGACCCGAACAACAGCGCGGTCAGCGCCGCGCCCTGGGGCAGCGCAAGCATCTTGCCGATCAGCTGGATGTACATCGCCATGATGGGCCCGCAGCTGGCCGACGCCAGCGAGGTGGCTATC < 1:1610957/150‑1 GGCTGGCCAGGTAGTTGGCCGAAAGGATAGCCACCTCGCTGGCGTCGGCCAGCTGCGGGCCCATCATGGCGATGTACATCCAGCTGATCGGCAAGATGCTTGCGCTGCCCCAGGGCGCGGCGCTGACCGCGCTGTTGTTCGGGTCCAACCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5922110‑5922262‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagCCATCCGGTGGTGCCGGTGCCTGGGTTGGACCCGAACAACAGCGCGGTCAGCGCCGCGCCCTGGGGCAGCGCAAGCATCTTGCCGATCAGCTGGATGTACATCGCCATGATGGGCCCGCAGCTGGCCGACGCCAGCGAGGTGGCTATC < NC_002947/5922282‑5922135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |