| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5976500 = | 116 (1.010) | 6 (0.060) | 4/228 | NT | 5.3% | coding (245/1491 nt) | yifB | ATP‑dependent chelatase |
| ? | NC_002947 | 5976543 = | 104 (0.970) | coding (288/1491 nt) | yifB | ATP‑dependent chelatase | |||||
CGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5976656‑5976500‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggtGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGAAGCAGGCCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAA > NC_002947/5976543‑5976690 CGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATG < 1:1554511/150‑1CGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATG < 1:746557/150‑1 GCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATCCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGC > 1:43218/1‑150 GCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGATCGCCCAAGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCTAGGATGCCCAGGGCAATGGC > 2:163948/1‑150 CCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCC < 2:2452076/150‑1 CTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCA > 2:960036/1‑150 TGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAG < 2:2572749/150‑1 TGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAG < 1:1603924/150‑1 TGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAG < 1:1628071/150‑1 GCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGG > 1:2881426/1‑150 CCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATG > 2:1686585/1‑110 CCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATG < 1:1686585/110‑1 GTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGT > 1:1601649/1‑61 GTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGT < 2:1601649/61‑1 GCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGA > 1:2695304/1‑150 ACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCCGTCGGGGAAATTCCGCGCGGTACATGGCGGTCTACCTGCGGCACTGGCGGCCCGCGAAG > 2:1023753/1‑150 CTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGAAGCA > 1:131039/1‑150 CTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTG < 1:1070385/135‑1 CTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTG > 2:1070385/1‑135 CTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAAGGCGTGCTACCTGCGGCACTGGCGGCACGCGAAGCA > 2:468020/1‑150 GGCCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGAAGCAGGCCGGGCGCTGGTGGTACCACGGGAAAATGCC > 1:309410/1‑150 CCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGTGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCAC > 2:1630356/1‑107 CCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGTGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCAC < 1:1630356/107‑1 CCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGAATCAGGCCGGGCGCTGGTGGTACCACGGGAAAATGCCGg > 1:1697778/1‑149 CCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGAAGCAGGCCGGGCGCTGGTGGTACCACGGGAAAATGCCGA < 1:1731688/150‑1 CCAGGTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGAAGCAGGCCGGGCGCTGGTGGTACCACGGGAAAATGCCGA < 1:1273329/150‑1 GTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGAAGCAGGCCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAA > 1:1870795/1‑150 GTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGAAGCAGGCCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAA < 1:1271671/150‑1 GTGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGAACGTGAAGCAGGCCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAA < 1:230723/150‑1 CGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCAATTTCCCCGACAGGGCCAGTTCGCCCAGGCATTCCATATCGGTCAGGGTGGCAATCGGCACCTGGCCGTCGGCGGCGAGGATGCCCAGGGCGATGGCCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5976656‑5976500‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggtGCCGATTGCCACCCTGACCGATATGGAATGCCTGGGCGAACTGGCCCTGTCGGGGAAATTGCGCCCGGTGCAGGGCGTGCTACCTGCGGCACTGGCGGCACGCGAAGCAGGCCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAA > NC_002947/5976543‑5976690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |