| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6067955 | 124 (1.080) | 8 (0.070) | 7/238 | NT | 6.1% | coding (542/1341 nt) | PP_5322 | metal ion transporter |
| ? | NC_002947 | = 6067976 | 125 (1.120) | coding (563/1341 nt) | PP_5322 | metal ion transporter | |||||
GTTCTACTGGGCGATGTACCCGGCCATCTACCTGCTCAATGCCAGCGCCAACACCATCCTGCGCATTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6067887‑6067955‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcGGGCCAGGCTCG‑CCCTGGCCGGCAATGCGCAGGATGGTGTTGGCGCTGGCATTGAGCAGGTAGATGGCCGGGTACATCGCCCAGTAGAACAGGTAAAGCGGCACGGCGGTCCACAGCGACAGCAGCTCTGGCTTGCGGATAGCCCAG < NC_002947/6067976‑6067830 GTTCTACTGGGCGATGTACCCGGCCATCTACCTGCTCAATGCCAGCGCCAACACCATCCTGCGCATTGCGGGCCAGGCTCG‑CCCTGGCCGGC > 1:373317/1‑92GTTCTACTGGGCGATGTACCCGGCCATCTACCTGCTCAATGCCAGCGCCAACACCATCCTGCGCATTGCGGGCCAGGCTCG‑CCCTGGCCGGC < 2:373317/92‑1 CCTGCTCAATGCCAGCGCCAACACCATCCTGCGCATTGCGGGCCAGGCTCG‑CCCTGGCCGGCAAT < 1:688700/65‑1 CCTGCTCAATGCCAGCGCCAACACCATCCTGCGCATTGCGGGCCAGGCTCG‑CCCTGGCCGGCAAT > 2:688700/1‑65 TCCTGCGCATTGCCGGCCAGG‑GCGAGCCTGGCCCGCAATGCGCAGGATGGTGTTGGCGCTGGCATTGAGCAGGTAGATGGCCGGGTACATCGCCCAGTAGAACAGGTAAAGCGGCACGGCGGTCCACAGCGACAGCAGCTCTGGC > 1:1327686/1‑145 TCCTGCGCATTGCCGGCCAGG‑GCGAGCCTGGCCCGCAATGCGCAGGATGGTGTTGGCGCTGGCATTGAGCAGGTAGATGGCCGGGTACATCGCCCAGTAGAACAGGTAAAGCGGCACGGCGGTCCACAGCGACAGCAGCTCTGGC < 2:1327686/145‑1 TCCTGCGCATTGCCGGCCAGG‑GCGAGCCTGGCCCGCAATGCGCAGGATGGTGTTGGCGCTGGCATTGAGCAGGTAGATGGCCGGGTACATCGCCCAGTAGAACAG < 1:105827/105‑1 TCCTGCGCATTGCCGGCCAGG‑GCGAGCCTGGCCCGCAATGCGCAGGATGGTGTTGGCGCTGGCATTGAGCAGGTAGATGGCCGGGTACATCGCCCAGTAGAACAG > 2:105827/1‑105 TGCGGGCCAGGCTCG‑CCCTGGCCGGCAATGCGCAGGATGGTGTTGGCGCTGGCATTGAGCAGGTAGATGGCCGGGTACATCGCCCAGTAGAACAGGTAAAGCGGCACGGCGGTCCACAGCGACAGCAGCTCTGGCTTGCGGATAGCCCAG < 1:2797064/150‑1 GTTCTACTGGGCGATGTACCCGGCCATCTACCTGCTCAATGCCAGCGCCAACACCATCCTGCGCATTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6067887‑6067955‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcGGGCCAGGCTCG‑CCCTGGCCGGCAATGCGCAGGATGGTGTTGGCGCTGGCATTGAGCAGGTAGATGGCCGGGTACATCGCCCAGTAGAACAGGTAAAGCGGCACGGCGGTCCACAGCGACAGCAGCTCTGGCTTGCGGATAGCCCAG < NC_002947/6067976‑6067830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |