| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6071269 = | 107 (0.930) | 3 (0.030) | 3/232 | NT | 3.0% | coding (365/771 nt) | phoU | phosphate transport‑associated protein |
| ? | NC_002947 | 6071306 = | 92 (0.850) | coding (328/771 nt) | phoU | phosphate transport‑associated protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAGTGCTTGCGCATCCTCGCCCGCCGCCAGCCAGCGGCCTCGGACCTGCGCCTGATCATCAGTATTTCCAAGTCGGTGATCGACCTGGAACGCATCGGTGACGAGTCGACCAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6071420‑6071269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgaTCTTGGTCGACTCGTCACCGATGCGTTCCAGGTCGATCACCGACTTGGAAATACTGATGATCAGGCGCAGGTCCGAGGCCGCTGGCTGGCGGCGGGCGAGGATGCGCAAGCACTCCTCGTCGATGTTGCGCTCCATCTGGTTGATCTG > NC_002947/6071306‑6071453 GAGTGCTTGCGCATCCTCGCCCGCCGCCAGCCAGCGGCCTCGGACCTGCGCCTGATCATCAGTATTTCCAAGTCGGTGATCGACCTGGCACGCATCGGTGACCTGTAGCCCGCGGTTGCGCGCCCCGCCAGCCAGCTGGGCGAAGAGGGC > 2:1110023/1‑150GAGTGCTTGCGCATCCTCGCCCGCCGCCAGCCAGCGGCCTCGGACCTGCGCCTGATCATCAGTATTTCCAAGTCGGTGATCGACCTGGAACGCATCGGTGACGAGTCGACCAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGC > 1:1663660/1‑150GAGTGCTTGCGCATCCTCGCCCGCCGCCAGCCAGCGGCCTCGGACCTGCGCCTGATCATCAGTATTTCCAAGTCGGTGATCGACCTGGAACGCATCGGTGACGAGTCGACCAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGC > 1:329534/1‑150GAGTGCTTGCGCATCCTCGCCCGCCGCCAGCCAGCGGCCTCGGACCTGCGCCTGATCATCAGTATTTCCAAGTCGGTGATCGACCTGGAACGCATCGGTGACGAGTCGACCAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGC < 2:2998040/150‑1 CCAGCGGCCTCGGACCTGCGCCTGATCATCAGTATTTCCAAGTCGGTGATCGACCTGGAACGCATCGGTGACGAGTCGACCAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGCGA > 1:238094/1‑122 CCAGCGGCCTCGGACCTGCGCCTGATCATCAGTATTTCCAAGTCGGTGATCGACCTGGAACGCATCGGTGACGAGTCGACCAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGCGA < 2:238094/122‑1 GAACGCATCGGTGACGAGTCGACCAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGC < 1:1028437/63‑1 GAACGCATCGGTGACGAGTCGACCAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGC > 2:1028437/1‑63 CAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGCGATCTTGGTCGACTCGTCACCGATGCGTTCCAGGTCGATCACCGACTTGGAAATACTGATGATCAGGCGCAGGTCCGAGGCCGCTGGCTGGCGGCGGGCGA < 1:1254835/141‑1 CAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGCGATCTTGGTCGACTCGTCACCGATGCGTTCCAGGTCGATCACCGACTTGGAAATACTGATGATCAGGCGCAGGTCCGAGGCCGCTGGCTGGCGGCGGGCGA > 2:1254835/1‑141 AAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGCGATCTTGGTCGACTCGTCACCGATGCGTTCCAGGTCGATCACCGACTTGGAAATACTGATGATCAGGCGCAGGTCCGAGGCCGCTGGCTGGCGGCGGGCGAGGATGCGCAA > 1:2544572/1‑150 GCGATCTTGGTCGACTCGTCACCGATGCGTTCCAGGTCGATCACCGACTTGGAAATACTGATGATCAGGCGCAGTTCCTAGGCCGCTGGCTGGCGGCGGGCGAGGATGCGCAAGCACTCCTCGTCGATGTTGCGCTCCATCTGGTTGATC < 1:2674558/150‑1 GATCTTGGTCGACTCGTCACCGATGCGTTCCAGGTCGATCACCGACTTGGAAATACTGATGATCAGGCGCAGGTCCGAGGCCGCTGGCTGGCGGCGGGCGAGGATGCGCAAGCACTCCTCGTCGATGTTGCGCTCCATCTGGTTGATCTG > 2:2795466/1‑150 GAGTGCTTGCGCATCCTCGCCCGCCGCCAGCCAGCGGCCTCGGACCTGCGCCTGATCATCAGTATTTCCAAGTCGGTGATCGACCTGGAACGCATCGGTGACGAGTCGACCAAGATCGCCCGCCGCGCCATCCAGCTGTGCGAAGAGGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6071420‑6071269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgaTCTTGGTCGACTCGTCACCGATGCGTTCCAGGTCGATCACCGACTTGGAAATACTGATGATCAGGCGCAGGTCCGAGGCCGCTGGCTGGCGGCGGGCGAGGATGCGCAAGCACTCCTCGTCGATGTTGCGCTCCATCTGGTTGATCTG > NC_002947/6071306‑6071453 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |