New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6109641 =	117 (1.020)	5 (0.050)	4/234	NT	4.3%	coding (53/972 nt)	PP_5359	CobW/P47K family protein
	?	NC_002947	6109666 =	113 (1.030)					coding (28/972 nt)	PP_5359	CobW/P47K family protein
Rejected: Frequency below/above cutoff threshold.

CATCGGTCACCTTCGGCGCAGCGGGGGCGTTTGCTGCTCAGCCTTGACTGGCTGGCTTGACGGCGCATAGTGAGGCATCACCGCCGCCTGAAGCCACCCCATGCTGCAGAACATTCCCACCCATGTAATTGCCGGCCCCCTTGGTGCTGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6109793‑6109641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaTTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAAGCCAGCCAGTCAAGGCTGAGCAGCAAACGCCCCCGCTGCGCCGAAGGTGACCGATGCACCAAGCCTGCCCCTTCGT  >  NC_002947/6109666‑6109813                                                                                                                                                                                                                                                                                                               CATCGGTCACCTTCGGCGCAGCGGGGGCGTTTGCTGCTGAGCCTTGACTGGCTGGCTTGACGGCGCATAGTGAGGCATCACCGCCGCCTGAAGCCACCCCATGCTGCAGAACATTCCCACCCATGTAATTGCCGGCCCCCTTGGTGCTGG                                                                                                                                                         <  1:161288/150‑1    CGGTCACCTTCGGCGCAGCGGGGGCGTTTGCTGCTCAGCCTTGACTGGCTGGCTTGACGGCGCATAGTGAGGCATCACCGCCGCCTGAAGCCACCCCATGCTGCAGAACATTCCCACCCATGTAATTGCCGGCCCCCTTGGTGCTGGCAA                                                                                                                                                      <  1:1853052/150‑1                                                                                                                         CCATGTAATTGCCGGCCCCCTTGGTGCTGGCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGC                                                                                                                  <  1:2807332/69‑1                                                                                                                         CCATGTAATTGCCGGCCCCCTTGGTGCTGGCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGC                                                                                                                  >  2:2807332/1‑69                                                                                                                            TGTAATTGCCGGCCCCCTTGGTGCTGGCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAAGCCAGCCAGTCAAGGCTGAGCAGCAAACGCCCCCGCTGCGCCGAAGGT                              >  2:250797/1‑150                                                                                                                            TGTAATTGCCGGCCCCCTTGGTGCTGGCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAA                                                                              <  1:1351067/102‑1                                                                                                                            TGTAATTGCCGGCCCCCTTGGTGCTGGCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAA                                                                              >  2:1351067/1‑102                                                                                                                                                     GGCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAAGCCAGCCAGTCAAGGCTGAGCAGCAAACGCCCCCGCTGCGCCGAAGGTGACCGATGCACCAAGCCTGCCCCTT     <  2:689109/150‑1                                                                                                                                                     GGCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGC                                                                                                >  1:2384200/1‑59                                                                                                                                                     GGCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGC                                                                                                <  2:2384200/59‑1                                                                                                                                                      GCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAAGCCAGCCAGTCAAGGCTGAGCAGCAAACGCCCCCGCTGCGCCGAAGGTGACCGATGCACCAAGCCTGCCCCTTC    <  1:1575457/150‑1                                                                                                                                                      GCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAAGCCAGCCAGTCAAGGCTGAGCAGCAAACGCCCCCGCTGCGCCGAAGGTGACCGATGCACCAAGCCTGCCCCTTC    <  1:2648374/150‑1                                                                                                                                                      GCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAAGCCAGCCAGTCAAGGCTGAGCAGCAAACGCCCCCGCTGCGCCGAAGGTGACCGATGCACCAAGCCTGCCCCTTC    <  2:161288/150‑1                                                                                                                                                      GCAATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAAGCCAGCCAGTCAAGGCTGAGCAGCAAACGCCCCCGCTGCGCCGAAGGTGACCGATGCACCAAGCCTGCCCCTTC    <  2:1955170/150‑1                                                                                                                                                        AATTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAAGCCAGCCAGTCAAGGCTGAGCAGCAAACGCCCCCGCTGCGCCGAAGGTGACCGATGCACCAAGCCTGCCCCTTCGT  <  1:1213746/150‑1                                                                                                                                                                                                                                                                                                               CATCGGTCACCTTCGGCGCAGCGGGGGCGTTTGCTGCTCAGCCTTGACTGGCTGGCTTGACGGCGCATAGTGAGGCATCACCGCCGCCTGAAGCCACCCCATGCTGCAGAACATTCCCACCCATGTAATTGCCGGCCCCCTTGGTGCTGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6109793‑6109641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaTTACATGGGTGGGAATGTTCTGCAGCATGGGGTGGCTTCAGGCGGCGGTGATGCCTCACTATGCGCCGTCAAGCCAGCCAGTCAAGGCTGAGCAGCAAACGCCCCCGCTGCGCCGAAGGTGACCGATGCACCAAGCCTGCCCCTTCGT  >  NC_002947/6109666‑6109813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.