| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6140035 | 79 (0.690) | 6 (0.060) | 6/230 | NT | 7.3% | coding (1184/1473 nt) | cusB | CzcB family copper RND transporter membrane fusion protein |
| ? | NC_002947 | = 6140040 | 77 (0.710) | coding (1189/1473 nt) | cusB | CzcB family copper RND transporter membrane fusion protein | |||||
GATGGTCGCCGAAGACCAAGGCCGTTTCCGCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6139883‑6140035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctcaaTACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGTCTTCG < NC_002947/6140040‑6139892 GATGGTCGCCGAAGACCAAGGCCGTTTCCGCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCT > 2:2836033/1‑150GATGGTCGCCGAAGACCAAGGCCGTTTCCGCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCT < 1:1680865/150‑1 GCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAATACCCTTGAGGCTTGCT < 2:589738/141‑1 GCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAATACCCTTGAGGCTTGCT > 1:589738/1‑141 CTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAG < 1:778959/101‑1 CTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAG > 2:778959/1‑101 GGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAG > 2:1223668/1‑98 GGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAG < 1:1223668/98‑1 GGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAA < 1:1966555/89‑1 GGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAA > 2:1966555/1‑89 CATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAATACCCTTGAGGCT < 1:2703912/53‑1 CATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAATACCCTTGAGGCT > 2:2703912/1‑53 TCCGAAGCAAGCCTCAAGGGTATTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTG > 1:1947832/1‑108 TCCGAAGCAAGCCTCAAGGGTATTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTG < 2:1947832/108‑1 CTCAATACCCTTGAGGCTTTCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGG < 1:2801994/112‑1 CTCAATACCCTTGAGGCTTTCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGG > 2:2801994/1‑112 CTCAATACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGTC > 1:1088201/1‑150 CTCAATACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGT < 1:315918/149‑1 CTCAATACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGT > 2:315918/1‑149 CTCAATACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGG < 2:1191245/133‑1 CTCAATACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGG > 1:1191245/1‑133 ATACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGTCTTCG < 1:1579686/150‑1 GATGGTCGCCGAAGACCAAGGCCGTTTCCGCCCAATAGAGGTGGTGCTAGGCCAGGAGAACGGCGGCCAGGTCGCAATCTTGAAAGGCCTGCAGGCCGGGCAGAAAGTCGTGGCATCCGGGCAATTCCTGATCGACTCCGAAGCAAGCCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6139883‑6140035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctcaaTACCCTTGAGGCTTGCTTCGGAGTCGATCAGGAATTGCCCGGATGCCACGACTTTCTGCCCGGCCTGCAGGCCTTTCAAGATTGCGACCTGGCCGCCGTTCTCCTGGCCTAGCACCACCTCTATTGGGCGGAAACGGCCTTGGTCTTCG < NC_002947/6140040‑6139892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |