BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 383390	120 (1.050)	10 (0.100)	7/218	NT	7.8%	intergenic (+47/‑136)	PP_0319/PP_0320	hypothetical protein/methyl‑accepting chemotaxis transducer
*	?	NC_002947	= 383406	130 (1.270)	10 (0.100)	7/218	NT	7.8%	intergenic (+63/‑120)	PP_0319/PP_0320	hypothetical protein/methyl‑accepting chemotaxis transducer

Only 100 of 208 total aligned reads displayed.

GTTGAGCTGCAGAAGGAGCATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCG  >  NC_002947/383245‑383539

         cAGAAGGAGCATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCaa                                                                                                                                          >  1:2346624/1‑150 (MQ=255)

             aGGAGCATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCAGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACc                                                                                                                                      >  2:1903385‑M2/1‑149 (MQ=255)

               gAGCATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgc                                                                                                                                    <  2:620524‑M2/150‑4 (MQ=255)

                  cATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGgtgttgaagccactgacgcatt                                                                                                                                 >  1:1404278‑M1/1‑128 (MQ=255)

                  cATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcatt                                                                                                                                 <  2:1963702‑M2/150‑7 (MQ=255)

                     cagcagACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgc                                                                                                                              >  2:2545928‑M2/1‑141 (MQ=255)

                      agcagACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcg                                                                                                                             >  1:2154252‑M2/1‑140 (MQ=255)

                      agcagACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcg                                                                                                                             <  2:2154252‑M2/150‑11 (MQ=255)

                       gcagACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGgtgttgaagccactgacgcattcgcgg                                                                                                                            <  2:1404278‑M1/150‑28 (MQ=255)

                       gcagACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTCGATCCGAACGATCCGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgg                                                                                                                            >  2:1618293‑M2/1‑139 (MQ=255)

                              cTTGCGCGAACTCAAGCGCAGATCGACGCCACTGTGGATGCCAGCGTGCGTACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAAcc                                                                                                                     >  1:1607012/1‑150 (MQ=255)

                                 gcgcGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGc                                                                                                                  <  1:2205386/150‑1 (MQ=255)

                                     gAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCAGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCt                                                                                                              >  1:506418/1‑150 (MQ=255)

                                        cTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACa                                                                                                           <  2:2497094/150‑1 (MQ=255)

                                          cAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAgg                                                                                                         >  1:174114/1‑150 (MQ=255)

                                             gcgcAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAgg                                                                                                         <  2:197811/147‑1 (MQ=255)

                                             gcgcAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAgg                                                                                                         >  1:197811/1‑147 (MQ=255)

                                             gcgcAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTg                                                                                                      >  1:323180/1‑150 (MQ=255)

                                               gcAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGt                                                                                                                                                      >  1:741865/1‑100 (MQ=255)

                                                 aGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgg                                                                                                                            <  2:357583‑M2/124‑12 (MQ=255)

                                                 aGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATc                                                                                                  >  2:1684947/1‑150 (MQ=255)

                                                  gATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCt                                                                                                 <  2:1306241/150‑1 (MQ=255)

                                                    tCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGa                                                                                               <  2:1607012/150‑1 (MQ=255)

                                                       aCGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAggg                                                                                                        <  1:274967/138‑1 (MQ=255)

                                                          ccACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGACCCCCCGTAGGCGCGGATTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCtt                                                                                         <  1:2495152/150‑1 (MQ=255)

                                                           cACGGTGGATGCCACCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGgtgttgaagccactgacgcattcgcgg                                                                                                                            <  2:1920986‑M1/114‑28 (MQ=255)

                                                            aCGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCa                                                                                       >  1:2416437/1‑150 (MQ=255)

                                                                tGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGc                                                                                                                  <  2:317931/119‑1 (MQ=255)

                                                                   aTGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACt                                                                                <  1:569947/150‑1 (MQ=255)

                                                                      ccATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGa                                                                             <  2:2416437/150‑1 (MQ=255)

                                                                      ccATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGa                                                                             <  2:2997358/150‑1 (MQ=255)

                                                                      ccATCGTGCGGACAATCGCTGAGAAATAAGCCCCGTACACCATCACCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGa                                                                             <  2:1412839/150‑1 (MQ=255)

                                                                      ccAGCGTGCGGACGATCAGTGAGCAATAAGCCCCGGACACCGCCCCCCCGTAGCAGCGGGTTCACCCGCAAATGCGTCATTGGCTCCAACAGCGCTGTCGCGGGTAAACCCGCTCCTACAGGGTGCAGCTGATTGCTTCAGATCACTGGa                                                                             <  2:2771506/150‑1 (MQ=37)

                                                                        aTCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgg                                                                                                                            >  2:1710968‑M2/1‑90 (MQ=255)

                                                                         tCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTa                                                                          >  2:1832945/1‑150 (MQ=255)

                                                                            tGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTgg                                                                              >  1:1893118/1‑143 (MQ=255)

                                                                            tGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTgg                                                                              <  2:1893118/143‑1 (MQ=255)

                                                                            tGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCACCGTAGAAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCa                                                                                  >  2:2487874/1‑139 (MQ=255)

                                                                                gACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCGTCTGATTGCTTCAGATCACTGGATTAACTGGAt                                                                   >  1:2514145/1‑150 (MQ=255)

                                                                                 aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTa                                                                                                             >  2:213014/1‑107 (MQ=255)

                                                                                 aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTa                                                                                                             <  1:213014/107‑1 (MQ=255)

                                                                                 aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGa                                                                                               >  2:148602/1‑121 (MQ=255)

                                                                                 aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGa                                                                                               <  1:148602/121‑1 (MQ=255)

                                                                                 aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATa                                                                  <  2:723037/150‑1 (MQ=255)

                                                                                   cATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGCTTGCTTCAGATCACTGGATTAACTGGATAca                                                                >  1:584459/1‑149 (MQ=255)

                                                                                      cGCTGAGCAATAAGCCCCGTACACCGTCCCCCCTTAGGAGCGGGTTCACCCGCGGGGGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCaa                                                             <  1:30875/150‑1 (MQ=255)

                                                                                      cGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCaa                                                             <  1:1101479/150‑1 (MQ=255)

                                                                                        cTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAgt                                                           <  1:1832945/150‑1 (MQ=255)

                                                                                         tGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGgtgttgaagccactgacgcattcgcgg                                                                                                                            >  1:734719‑M1/1‑57 (MQ=255)

                                                                                         tGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACc                                                                                                                                      <  2:1903957‑M2/74‑2 (MQ=255)

                                                                                         tGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACc                                                                                                                                      >  1:1903957‑M2/1‑73 (MQ=255)

                                                                                              aaTAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATc                                                                                                  >  1:1671085/1‑105 (MQ=255)

                                                                                              aaTAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATc                                                                                                  <  2:1671085/105‑1 (MQ=255)

                                                                                               aTAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTg                                                                               <  2:548130/123‑1 (MQ=255)

                                                                                               aTAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATaca                                                    <  1:902862/150‑1 (MQ=255)

                                                                                                tAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAgtgt                                                         <  2:3021148/144‑1 (MQ=255)

                                                                                                tAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAgtgt                                                         >  1:3021148/1‑144 (MQ=255)

                                                                                                    ccccGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCACAGCATCAGTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTc                                               >  2:417426/1‑150 (MQ=38)

                                                                                                    ccccGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTc                                               >  1:2913095/1‑150 (MQ=255)

                                                                                                      ccGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCg                                             >  2:294845/1‑150 (MQ=255)

                                                                                                         tACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCaa                                          >  1:2945289/1‑150 (MQ=255)

                                                                                                           ctccGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCaaaa                                        <  1:1428937/148‑1 (MQ=255)

                                                                                                             ccGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACa                                      >  2:1208473/1‑150 (MQ=255)

                                                                                                                   ccccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCCCTGGATTAACTGGATACGCAAGTGCATACACTTTCCGTAAAACaataatt                                >  2:91837/1‑149 (MQ=255)

                                                                                                                    cccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTg                                                                      <  2:2575140/111‑1 (MQ=255)

                                                                                                                    cccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGc                                            <  2:502670/137‑1 (MQ=255)

                                                                                                                    cccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTAGAGATTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAAtgt                               <  2:1951121/150‑1 (MQ=255)

                                                                                                                       gTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGa                                                                             >  1:881296/1‑101 (MQ=255)

                                                                                                                         aGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCggg                          <  2:769925/150‑1 (MQ=255)

                                                                                                                           gAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTg                                                                      >  2:2235959/1‑104 (MQ=255)

                                                                                                                                 gTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACCCTTTCCGCAAAACAATAATGTGCGGGGAGTAggg                  <  2:2346624/150‑1 (MQ=255)

                                                                                                                                 gTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAggg                  <  1:1258669/150‑1 (MQ=255)

                                                                                                                                      cccGCGAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctg             >  2:1949301‑M1/1‑12 (MQ=255)

                                                                                                                                      cccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACt                                                                                >  1:2278406/1‑83 (MQ=255)

                                                                                                                                       ccGCGAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttgtcgcaagggtctgc            >  1:1420326‑M1/1‑11 (MQ=255)

                                                                                                                                       ccGCGAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgc            >  2:2458497‑M1/1‑11 (MQ=255)

                                                                                                                                       ccGCGAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatct                                      >  1:357583‑M1/1‑11 (MQ=255)

                                                                                                                                       ccGCGAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatg                                                            >  1:1347588‑M1/1‑11 (MQ=255)

                                                                                                                                       ccGCGAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgat                                                             <  1:1710968‑M1/101‑91 (MQ=255)

                                                                                                                                       ccGCGAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacgggaagcggggctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgc            >  1:983328‑M1/1‑11 (MQ=255)

                                                                                                                                       ccGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacggtggcatccaccgtg                                                >  1:1920986‑M2/1‑27 (MQ=255)

                                                                                                                                       ccGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgc            <  2:1491003‑M2/150‑124 (MQ=255)

                                                                                                                                       ccGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctca                                                                              <  2:734719‑M2/84‑58 (MQ=255)

                                                                                                                                       ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTg                                                                               >  1:2991946/1‑83 (MQ=255)

                                                                                                                                       ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACaataa                                  <  2:1549638/128‑1 (MQ=255)

                                                                                                                                       ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACaataa                                  >  1:1549638/1‑128 (MQ=255)

                                                                                                                                        cgcgAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgc                                                                  >  2:232144‑M1/1‑10 (MQ=255)

                                                                                                                                        cgcgAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcag                                                                             >  2:1382424‑M1/1‑10 (MQ=255)

                                                                                                                                        cgcgAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcag                                                                             <  1:1382424‑M1/84‑75 (MQ=255)

                                                                                                                                        cgcgAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacgggg                                                                                         >  2:1589540‑M1/1‑10 (MQ=255)

                                                                                                                                        cgcgAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacgggg                                                                                         <  1:1589540‑M1/72‑63 (MQ=255)

                                                                                                                                         gcgAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgcgcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgctg          >  2:1361900‑M1/1‑9 (MQ=255)

                                                                                                                                         gcgAATGCGTCAGTGGCTTCAACACcgcattcgcgggtaaacccgctcctacagggtgacggtgtacgggg                                                                                         >  2:1755376‑M2/1‑25 (MQ=255)

                                                                                                                                         gcgAATGCGTCAGTGGCTTCAACACcgcattcgcgggtaaacccgctcctacagggtgacggtgtacgggg                                                                                         <  1:1755376‑M2/71‑47 (MQ=255)

                                                                                                                                          cgAATGCGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgctga         <  1:211384‑M1/150‑143 (MQ=255)

                                                                                                                                           gAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTAt        <  2:84982/150‑1 (MQ=255)

                                                                                                                                            aaTGCGTCAGTGGCTTCAACACcgcattcgagggtgaacccgctactacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgctgatg       <  2:55206‑M2/150‑129 (MQ=255)

                                                                                                                                                cGgtgttgaagccactgacgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgctgatgctcc   <  1:682509‑M1/150‑149 (MQ=255)

                                                                                                                                                cGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGc   <  1:999822/150‑1 (MQ=255)

                                                                                                                                                 gTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCg  >  1:2685169/1‑150 (MQ=255)

GTTGAGCTGCAGAAGGAGCATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCG  >  NC_002947/383245‑383539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.