New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 511926 =100 (0.870)6 (0.060) 6/222 NT 6.4% intergenic (+63/‑85) trpC/PP_0423 indole‑3‑glycerol phosphate synthase/hypothetical protein
?NC_002947 511966 = 84 (0.810)intergenic (+103/‑45) trpC/PP_0423 indole‑3‑glycerol phosphate synthase/hypothetical protein

Only 100 of 132 total aligned reads displayed.

TTCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCAGGAACTGCTGGC  >  NC_002947/511777‑512075
                                                                                                                                                     |                                                                                                                                                     
aacagcacgccactttcgcgttcgccacggcagacggcggccagcagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaac                                                                                                                                                       >  1:2427113‑M1/150‑150 (MQ=255)
 tCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGcc                                                                                                                                                      <  2:2668320/150‑1 (MQ=255)
   aTGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTTTAATGGCCTCTTCGCGGGCAAGccc                                                                                                                                                     <  2:118978/149‑1 (MQ=255)
   aTGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGccc                                                                                                                                                     >  1:118978/1‑149 (MQ=255)
     cacgccactttcgcgttcgccacggcagacggcggccagcagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtcaaCCCgcc                                                                                                                                                  <  2:3002811‑M1/6‑2 (MQ=255)
     cacgccactttcgcgttcgccacggcagacggcggccagcagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCt                                                                                                                                                  <  2:2637‑M1/6‑1 (MQ=255)
        gccactttcgcgttcgccacggcagacggcggccagcagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTCCt                                                                                                                                               <  2:1395345‑M1/9‑1 (MQ=255)
          ccGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCTTGCCCGcgaagag                                                                                                                                             <  1:943019/150‑7 (MQ=255)
          cactttcgcgttcgccacggcagacggcggccaggagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacntatgatgttnatttcactggcctcttcgcgggtaaaCCCGCTCCTac                                                                                                                                             >  1:795183‑M1/140‑150 (MQ=255)
          cactttcgcgttcgccacggcagacggcggccagcagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTCCTac                                                                                                                                             <  2:140049‑M1/11‑1 (MQ=255)
           cGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCTCGGGCAAGCCCCCTCCTacc                                                                                                                                            >  1:2023559/1‑149 (MQ=255)
             agcagcCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACg                                                                                                                                          <  1:2641397/150‑1 (MQ=255)
             agcagcCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACg                                                                                                                                          >  1:2197781/1‑150 (MQ=255)
              gcagcCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACgg                                                                                                                                         <  1:2205399/150‑1 (MQ=255)
                       gccacggcagacggcggccagcagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTc                                                                                                                                                 >  1:129143‑M1/127‑133 (MQ=255)
                       gccacggcagacggcagccagcagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTc                                                                                                                                                 <  2:129143‑M1/7‑1 (MQ=255)
                         cacggcagacggcggccagcagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaacc                                                                                                                                                      >  2:2936180‑M1/125‑126 (MQ=255)
                         cacggcagacggcggccagcagttcctgctcggcgtgcagcccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaacc                                                                                                                                                      <  1:2936180‑M1/2‑1 (MQ=255)
                         cacggcagacggcgcccagcagttcctgctcggagtgcaggccttgttcgacgctcagggccaggggttgatcggtcagtgatccacctatgatgttgatttcactggcctcttcgcgggtaacCCCGCTCCTACACGGGTACGCGCCCt                                                                                                                              >  1:632504‑M1/125‑150 (MQ=255)
                                    cGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGc                                                                                                                   <  2:1608220/150‑1 (MQ=255)
                                     ggCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCg                                                                                                                  <  1:115845/150‑1 (MQ=255)
                                      ggccagcagttcctgctcggcgtgcaggccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCgg                                                                                                                 >  1:1879321‑M1/112‑150 (MQ=255)
                                      gCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCTTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCgg                                                                                                                 <  2:595269/150‑1 (MQ=255)
                                       cTGTTCTGCCCGGAGCAGGAGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCggg                                                                                                                <  2:2023559/150‑1 (MQ=255)
                                        tGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGt                                                                                                               <  1:2352727/150‑1 (MQ=255)
                                          ttcttcCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGttt                                                                                                             >  1:1323947/1‑150 (MQ=255)
                                            cttcCCCGATCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGATACGCGCCCTGTCGTAGGAGCGGGTTTAc                                                                                                           >  1:2637/1‑150 (MQ=255)
                                                 ccGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAAGGCAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTAGCGGGCGAGCCCGATCCTACACCGGTAAGCGTCCGGTTGTGGGAGCGTGGTTGCAcgcg                                                                                                      >  1:243214/1‑150 (MQ=255)
                                                     gCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACCGGTTCGCGCCCTGTCGGAGGAGCGGGTTTACCCGCGAagg                                                                                                  >  1:71423/1‑149 (MQ=255)
                                                        ggTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                               <  1:1683573/150‑1 (MQ=255)
                                                        ggTGAAGAAGACTGTTCAGCAACTGGACTGATCAAAAACCGCCGACGTTAGTTCCGGCGTTTTTTTTCCTGCCGTCAGCGTTTCGCGGGCAAGCCCTCTTCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                                               <  1:1455257/150‑1 (MQ=255)
                                                         gTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGccc                                                                                                                               <  2:2845113/117‑1 (MQ=255)
                                                         gTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGccc                                                                                                                               >  1:2845113/1‑117 (MQ=255)
                                                          tGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                                             <  1:335218/150‑1 (MQ=255)
                                                            aagaagACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGt                                                                                           <  2:2993624/150‑1 (MQ=255)
                                                              gaagaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACg                                                                                                                                          >  1:2645734/1‑101 (MQ=255)
                                                              gaagaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACg                                                                                                                                          <  2:2645734/101‑1 (MQ=255)
                                                              gaagaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGcc                                                                                                                                >  1:1112458/1‑111 (MQ=255)
                                                               aagaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCATCTTCTGGGGGAAGCCCGCGCCTACACGGGTATGCGCCCTGTTGTAGGAGAGGGTTTACCCGCGGAGCGGCCAGAGaa                                                                                        >  1:2703642/1‑150 (MQ=255)
                                                                 gaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                                             >  2:2333934/1‑143 (MQ=255)
                                                                 gaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                                             <  1:2333934/143‑1 (MQ=255)
                                                                 gaCTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAAt                                                                                      <  1:2357550/150‑1 (MQ=255)
                                                                  ccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTCCt                                                                                                                                               >  2:2727013‑M1/84‑92 (MQ=255)
                                                                  ccttgttcgacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTCCt                                                                                                                                               <  1:2727013‑M1/9‑1 (MQ=255)
                                                                    tGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCaa                                                                                   >  1:1691036/1‑150 (MQ=255)
                                                                     gTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAAc                                                                                  <  2:2244335/150‑1 (MQ=255)
                                                                     gTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAAc                                                                                  >  1:1668063/1‑150 (MQ=255)
                                                                          gacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCggg                                                                                                                >  2:2440816‑M1/76‑115 (MQ=255)
                                                                          gacgctcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCggg                                                                                                                <  1:2440816‑M1/40‑1 (MQ=255)
                                                                          gCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACgg                                                                                                                                         >  1:634309/1‑90 (MQ=255)
                                                                          gCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACgg                                                                                                                                         <  2:634309/90‑1 (MQ=255)
                                                                          gCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCgg                                                                                                                 <  2:2797760/114‑1 (MQ=255)
                                                                          gCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCgg                                                                                                                 >  1:2797760/1‑114 (MQ=255)
                                                                               tcagggccaggggttgatcggtcattgatccacctatgatgttgatttcactggcctcttcgcgggtaaaCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGc                                                                                                                   <  1:730701‑M1/37‑1 (MQ=255)
                                                                                  aCTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGAt                                                                     <  1:1270956/150‑1 (MQ=255)
                                                                                    tGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGAt                                                                     >  2:2075702/1‑148 (MQ=255)
                                                                                      aTCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTc                                                                                                                           <  2:665862/92‑1 (MQ=255)
                                                                                      aTCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTc                                                                                                                           >  1:665862/1‑92 (MQ=255)
                                                                                        cAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAgg                                                                          >  2:3039503/1‑139 (MQ=255)
                                                                                        cAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAgg                                                                          <  1:3039503/139‑1 (MQ=255)
                                                                                        cAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGa                                                               <  2:1323947/150‑1 (MQ=255)
                                                                                         aaaTGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGAc                                                              <  1:883924/150‑1 (MQ=255)
                                                                                         aaaTGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGAc                                                              >  2:1316648/1‑150 (MQ=255)
                                                                                           aTGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTa                                                                                                                                      <  1:175419/76‑1 (MQ=255)
                                                                                             gaggCCGGCGTTTTTGCAGGCTTTTTTGTCCCTGGAACTGCCGCGTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGAt                                                          <  2:1110395/147‑1 (MQ=38)
                                                                                                gCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCaa                                                       <  2:1668063/150‑1 (MQ=255)
                                                                                                 ccGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCTTGCCCGcgaa                                                                                                                                                <  2:886676/60‑4 (MQ=21)
                                                                                                  cGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGt                                                                         <  2:1477834/130‑1 (MQ=255)
                                                                                                  cGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGt                                                                         >  1:1477834/1‑130 (MQ=255)
                                                                                                             ccGGCTTTTTTGTACCTGTAATTGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGa                                          <  2:2703642/150‑1 (MQ=255)
                                                                                                             ccGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAg                                                                           <  2:2525106/117‑1 (MQ=255)
                                                                                                             ccGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAg                                                                           >  1:2525106/1‑117 (MQ=255)
                                                                                                             ccGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGAGGATCAATGACCGATCAACCCCTGGCCCTGa                                          >  1:3002811/1‑150 (MQ=255)
                                                                                                              cGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                                             >  2:2207679/1‑98 (MQ=255)
                                                                                                              cGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                                             <  1:775498/98‑1 (MQ=255)
                                                                                                              cGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCa                                                                                             >  2:775498/1‑98 (MQ=255)
                                                                                                                gCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCg                                       >  2:1190997/1‑150 (MQ=255)
                                                                                                                 cTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGt                                      <  2:2197781/150‑1 (MQ=255)
                                                                                                                  ttttttGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACg                                                                                                                                          <  2:216472/49‑1 (MQ=255)
                                                                                                                  ttttttGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACg                                                                                                                                          >  1:216472/1‑49 (MQ=255)
                                                                                                                         tACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGa                                                           <  1:384999/121‑1 (MQ=255)
                                                                                                                          aCCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAgg                             >  2:2308413/1‑150 (MQ=255)
                                                                                                                           ccTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAAcat                                                                                >  2:2391225/1‑98 (MQ=255)
                                                                                                                           ccTGTAATGGCCTCGTCGCGGGCAAGCCCGCGCCTACACGGGTACGCGCCCTATCGTAGGAGCGGGTTTACCCGCGACGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCGCTGGCGCTGGGCGTCGACCGAGGc                            >  1:745503/1‑150 (MQ=38)
                                                                                                                            cTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTg                                           >  1:2871389/1‑134 (MQ=255)
                                                                                                                            cTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTg                                           <  2:2871389/134‑1 (MQ=255)
                                                                                                                               tAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCaa                                                                  >  1:918755/1‑108 (MQ=255)
                                                                                                                                     ccTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCg                  >  1:515892/1‑150 (MQ=255)
                                                                                                                                      ctctTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCCACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAATGCCTGCACGCCGa                 >  2:1038918/1‑150 (MQ=255)
                                                                                                                                       tctTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAg                >  2:2053723/1‑150 (MQ=255)
                                                                                                                                       taggagcgGGCTTGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAAt                                                                 >  2:896795/6‑101 (MQ=38)
                                                                                                                                         ttCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATc                                                         >  2:433006/1‑107 (MQ=255)
                                                                                                                                         ttCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATc                                                         <  1:433006/107‑1 (MQ=255)
                                                                                                                                         ttCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCa              <  2:1691036/150‑1 (MQ=255)
                                                                                                                                              gggCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATGAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCAGGAAc         >  2:455276/1‑150 (MQ=255)
                                                                                                                                              gggCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCAGGAAc         >  2:54984/1‑150 (MQ=255)
                                                                                                                                                 cAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGa                                          >  2:1152460/1‑114 (MQ=255)
                                                                                                                                                 cAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGa                                          <  1:1152460/114‑1 (MQ=255)
                                                                                                                                                    gCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCAGGAACTGCTgg   <  2:2502249/150‑1 (MQ=255)
                                                                                                                                                     CCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCAGGAACTGCTGgc  <  1:1395345‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TTCATGCGCGCCGAGCAGCCTGGCCTGGAATTACAGCGGCTGTTCTTCCCCGAGCAGGTGAAGAAGACTGTTCAGCAACTGGACTGATCAAATGAAGCCGGCGTTTTTGCCGGCTTTTTTGTACCTGTAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACACGGGTACGCGCCCTGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAAATCAACATCATAGGTGGATCAATGACCGATCAACCCCTGGCCCTGAGCGTCGAACAAGGCCTGCACGCCGAGCAGGAACTGCTGGC  >  NC_002947/511777‑512075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.