New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 52803718 (0.160)29 (0.270) 14/230 NT 63.1% noncoding (1272/2902 nt) PP_23SC 23S ribosomal RNA
?NC_002947 = 701130 NA (NA)noncoding (1277/2902 nt) PP_23SD 23S ribosomal RNA

TAACGGGGCTCAAACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACGTTAATCGACGCAGGGTTAGTCGGTCCCTAAGGCGAGGCTGAAAAGCGTAGTCGATGGAAAACAGGTTAATATTCCTGTACTTCCAGTTATTGCGATGGAGGGACGGA  >  NC_002947/527888‑528186
                                                                                                                                                     |                                                                                                                                                     
tAACGGGGCTCAAACCATGCACCGAAGCTACGGGTATCATCTTAAGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGT                                                                                                                                                       <  2:2216316‑M1/150‑1 (MQ=255)
       gCTCAAACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAAc                                                                                                                                                >  1:1756866/1‑150 (MQ=32)
        cTCAAACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGGGAAAAACt                                                                                                                                               >  1:2425949/1‑150 (MQ=17)
             aCCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcat                                                                                                                                          >  1:1831092‑M1/1‑137 (MQ=255)
             aCCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCAc                                                                                                                                          >  1:957636/1‑150 (MQ=32)
              ccATGCACCGAAGCTACGGGTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  1:2015722‑M1/150‑15 (MQ=255)
              ccATGCACCGAAGCTACGGGTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  1:1544724‑M1/150‑15 (MQ=255)
              ccATGCACCGAAGCTACGGGTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  2:2071258‑M1/150‑15 (MQ=255)
              ccATGCACCGAAGCTACGGGTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  2:1254705‑M1/150‑15 (MQ=255)
              ccAGGCACCGAAGCTACGGGTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  2:1330481‑M1/150‑15 (MQ=255)
                aTGCACCGAAGCTACGGGTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         >  1:2628329‑M1/1‑134 (MQ=255)
                aTGCACCGAAGCTACGGGTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  2:2628329‑M1/148‑15 (MQ=255)
                aTGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcattgt                                                                                                                                       <  1:798385‑M1/150‑17 (MQ=255)
                 tGCACCGAAGCTACGGGTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcattgtc                                                                                                                                      <  1:1674676‑M1/150‑18 (MQ=255)
                   cACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGaa                                                                                                                                    >  1:2345362/1‑150 (MQ=32)
                    aCCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGaaa                                                                                                                                   >  2:3068580/1‑150 (MQ=32)
                     ccGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcattgtcgtta                                                                                                                                  <  1:1073762‑M1/150‑22 (MQ=255)
                       gAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGAc                                                                                                                                >  2:187759/1‑150 (MQ=32)
                       gAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGAc                                                                                                                                <  2:590283/150‑1 (MQ=32)
                          gCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGATAGTGAAAAACTCGCACGCCGAAAGACCaa                                                                                                                             <  1:575598/150‑1 (MQ=17)
                            tACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTTTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAgg                                                                                                                           <  2:370539/150‑1 (MQ=17)
                            tACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTAAAAAACTCGCACGCCGAAAGACCAAgg                                                                                                                           <  1:1607781/150‑1 (MQ=17)
                               gggTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcattgtc                                                                                                                                      <  2:653590‑M1/136‑18 (MQ=255)
                               gggTATCATCTTATGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcattgtc                                                                                                                                      >  1:653590‑M1/1‑119 (MQ=255)
                                ggTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTc                                                                                                                       <  1:1746074/150‑1 (MQ=32)
                                 gcatcatcatAAGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGT                                                                                                                                                       >  1:758081‑M1/3‑117 (MQ=255)
                                 gcatcatcatAAGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGT                                                                                                                                                       <  2:758081‑M1/115‑1 (MQ=255)
                                  tATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCt                                                                                                                     >  1:950276/1‑150 (MQ=32)
                                  tATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGGTTGGTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCt                                                                                                                     >  1:2229177/1‑150 (MQ=255)
                                    tcatcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTgc                                                                                                                   <  2:957636/150‑1 (MQ=32)
                                      atcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcattgtc                                                                                                                                      >  2:2558526‑M1/1‑112 (MQ=255)
                                      atcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcattgtc                                                                                                                                      <  1:2558526‑M1/129‑18 (MQ=255)
                                      atcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTgcgc                                                                                                                 >  2:237989/1‑150 (MQ=32)
                                       tcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTc                                                                                                                       >  1:2748002/1‑143 (MQ=32)
                                       tcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTc                                                                                                                       <  2:2748002/143‑1 (MQ=32)
                                       tcTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCa                                                                                                                >  1:147986/1‑150 (MQ=32)
                                          tatgatgatgcgGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         >  2:1574445‑M1/4‑108 (MQ=255)
                                          tatgatgatgcgGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  1:1574445‑M1/119‑15 (MQ=255)
                                                                 ttCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  1:1733602‑M1/99‑15 (MQ=255)
                                                                 ttCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         >  2:1733602‑M1/1‑85 (MQ=255)
                                                                      tAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  2:1112338‑M1/94‑15 (MQ=255)
                                                                      tAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         >  1:1112338‑M1/1‑80 (MQ=255)
                                                                           cTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcattg                                                                                                                                        <  1:304600‑M1/90‑16 (MQ=255)
                                                                           cTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGGttttcactcgcattg                                                                                                                                        >  2:304600‑M1/1‑75 (MQ=255)
                                                                             gtgAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGT                                                                                                                                                       <  1:1453219‑M1/73‑1 (MQ=255)
                                                                             gtgAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGT                                                                                                                                                       >  2:1453219‑M1/1‑73 (MQ=255)
                                                                                                               aGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         <  2:1814396‑M1/53‑15 (MQ=255)
                                                                                                               aGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTttttcactcgcatt                                                                                                                                         >  1:1814396‑M1/1‑39 (MQ=255)
                                                                                                                                 aTGAGTAACGACAATGCGAGTgaaaaactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcgtaagatgatacccgtagc                      >  2:1831092‑M1/1‑21 (MQ=255)
                                                                                                                                   gAGTAACGACAATGCGAGTgaaaaactcgcattgtcgttactcatgtcagcattcgcacttctgatacctc                                                                                                   >  2:2392039‑M1/1‑19 (MQ=255)
                                                                                                                                   gAGTAACGACAATGCGAGTgaaaaactcgcattgtcgttactcatgtcagcattcgcacttctgatacctc                                                                                                   <  1:2392039‑M1/71‑53 (MQ=255)
                                                                                                                                      tAACGACAATGCGAGTgaaaaactcgcattgtcgttactcatgtcggcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcgg                 >  1:1412653‑M1/1‑16 (MQ=255)
                                                                                                                                             aaTGCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacagg                                                                      >  1:425335‑M1/1‑9 (MQ=255)
                                                                                                                                             aaTGCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacagg                                                                      <  2:425335‑M1/90‑82 (MQ=255)
                                                                                                                                               tGCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtt        <  2:2619238‑M1/150‑144 (MQ=255)
                                                                                                                                               tGCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtt        >  2:1381014‑M1/1‑7 (MQ=255)
                                                                                                                                               tGCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtt        <  2:719836‑M1/150‑144 (MQ=255)
                                                                                                                                               tGCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtt        <  1:1945293‑M1/150‑144 (MQ=255)
                                                                                                                                                gCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcctaagatgatacccgtagcttcggtgcatggttt       <  1:2958331‑M1/150‑145 (MQ=255)
                                                                                                                                                gCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagctgataaccgtagcttcggtgcatggttt       <  1:862503‑M1/150‑145 (MQ=255)
                                                                                                                                                gCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcattgttt       <  1:1272938‑M1/150‑145 (MQ=255)
                                                                                                                                                gCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggttt       <  1:2288149‑M1/150‑145 (MQ=255)
                                                                                                                                                gCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccggagcttcggtgcatggttt       >  2:232094‑M1/1‑6 (MQ=255)
                                                                                                                                                gCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgc                                                          >  1:2556497‑M1/1‑6 (MQ=255)
                                                                                                                                                gCGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgc                                                          <  2:2556497‑M1/99‑94 (MQ=255)
                                                                                                                                                 ctagtttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaa                                                             <  2:1108406‑M1/93‑91 (MQ=255)
                                                                                                                                                 cGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttg      >  1:2248‑M1/1‑5 (MQ=255)
                                                                                                                                                 cGAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaa                                                             >  1:1108406‑M1/1‑5 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacatgcttacagaacgctcctctaccgcatcatcataagattatacccgtagcttcggttcatggcttgt     >  2:1230932‑M1/1‑4 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttga     <  2:2274809‑M1/150‑147 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttga     <  1:2668460‑M1/150‑147 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttga     <  2:2235112‑M1/150‑147 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttga     <  2:1089334‑M1/150‑147 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttga     <  1:439095‑M1/150‑147 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttga     <  1:12842‑M1/150‑147 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttga     >  1:1835377‑M1/1‑4 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttga     >  2:1235029‑M1/1‑4 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttga     >  2:1115848‑M1/1‑4 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtt        <  2:1743164‑M1/147‑144 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtt        >  1:1743164‑M1/1‑4 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcat            <  1:706162‑M1/143‑140 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcat            >  2:706162‑M1/1‑4 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctga                                                                                                         >  1:2344112‑M1/1‑4 (MQ=255)
                                                                                                                                                  gAGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctga                                                                                                         <  2:2344112‑M1/50‑47 (MQ=255)
                                                                                                                                                   aGTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttgag    >  2:2947187‑M1/1‑3 (MQ=255)
                                                                                                                                                    gTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttgagc   <  2:1319389‑M1/150‑149 (MQ=255)
                                                                                                                                                    gTttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttgagc   >  2:1132034‑M1/1‑2 (MQ=255)
                                                                                                                                                     tttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggtgcatggtttgagcc  <  1:1647532‑M1/150‑150 (MQ=255)
                                                                                                                                                     tttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggt                >  1:159475‑M1/1‑1 (MQ=255)
                                                                                                                                                     tttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgtagcttcggt                <  2:159475‑M1/136‑136 (MQ=255)
                                                                                                                                                     tttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgt                         <  2:319104‑M1/127‑127 (MQ=255)
                                                                                                                                                     tttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttacagaacgctcctctaccgcatcatcataagatgatacccgt                         >  1:319104‑M1/1‑1 (MQ=255)
                                                                                                                                                     tttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttaca                                                                >  2:1876870‑M1/1‑1 (MQ=255)
                                                                                                                                                     tttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcaccttcacaggcttaca                                                                <  1:1876870‑M1/88‑88 (MQ=255)
                                                                                                                                                     tttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcacct                                                                             >  2:2106862‑M1/1‑1 (MQ=255)
                                                                                                                                                     tttttcactcgcattgtcgttactcatgtcagcattcgcacttctgatacctccagcaagcttctcaactcacct                                                                             <  1:2106862‑M1/75‑75 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TAACGGGGCTCAAACCATGCACCGAAGCTACGGGTATCATCTTACGATGATGCGGTAGAGGAGCGTTCTGTAAGCCTGTGAAGGTGAGTTGAGAAGCTTGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGACAATGCGAGTGAAAAACTCGCACGCCGAAAGACCAAGGTTTCCTGCGCAACGTTAATCGACGCAGGGTTAGTCGGTCCCTAAGGCGAGGCTGAAAAGCGTAGTCGATGGAAAACAGGTTAATATTCCTGTACTTCCAGTTATTGCGATGGAGGGACGGA  >  NC_002947/527888‑528186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.